Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H1DP16402 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 RNA5SP302-201ENST00000364896 100 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 RN7SKP186-201ENST00000365371 303 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 RN7SKP117-201ENST00000410175 264 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 AL161742.1-201ENST00000418154 584 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 GAPDHP23-201ENST00000444823 993 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 OSTCP1-201ENST00000455507 450 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 RN7SL326P-201ENST00000477493 296 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H1DP16402 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 AP001994.1-201ENST00000527539 826 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H1DP16402 RNU4ATAC-201ENST00000580972 127 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AL031429.2-201ENST00000602605 649 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 MIR6726-201ENST00000613751 61 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AL121985.3-201ENST00000620690 523 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AC103564.3-201ENST00000621194 220 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AC018558.4-201ENST00000622153 281 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H1DP16402 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H1DP16402 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 AC027575.3-201ENST00000583058 2747 ntBASIC5.21□□□□□ -1.58
HIST1H1DP16402 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H1DP16402 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.21□□□□□ -1.58
HIST1H1DP16402 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 RNU1-5P-201ENST00000362684 144 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 MIR301B-201ENST00000390813 78 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC026310.1-201ENST00000396004 378 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 SNORA77.2-201ENST00000408571 112 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 PTCD2P2-201ENST00000415579 1095 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 REG1CP-206ENST00000447469 496 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 RPL23AP60-201ENST00000450011 454 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC124945.1-201ENST00000485133 188 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 ST13P12-201ENST00000508958 1094 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 TOMM22P4-201ENST00000511318 336 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AP001858.2-201ENST00000536213 601 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 RPL7AP69-201ENST00000595306 806 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 SNORA74.4-201ENST00000607595 199 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC010998.3-201ENST00000613871 631 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AP003108.4-201ENST00000623917 878 ntBASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H1DP16402 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
HIST1H1DP16402 AC016583.1-201ENST00000624221 2431 ntBASIC5.19□□□□□ -1.58
HIST1H1DP16402 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H1DP16402 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H1DP16402 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms