Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 DNM1P47-203ENST00000571780 12667 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOBP13765 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 LINC01616-201ENST00000561816 2280 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AC011504.1-201ENST00000623331 4103 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 OR6K3-202ENST00000368146 996 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 VIM2P-201ENST00000402383 1294 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 UBE2V1P14-201ENST00000415815 558 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 CYP4F30P-202ENST00000420048 405 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AC114878.1-201ENST00000441166 358 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 FTH1P8-201ENST00000498161 514 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 RNA5SP116-201ENST00000516132 98 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 MIR5010-201ENST00000582846 120 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 AL589863.1-201ENST00000595383 631 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AL589765.6-201ENST00000601909 549 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AP002371.2-201ENST00000624450 503 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 SMG1P5-202ENST00000529428 4219 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 SMG1P2-201ENST00000566127 4221 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 AC217777.1-201ENST00000570034 1471 ntBASIC5.68□□□□□ -1.5
HLA-DOBP13765 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DOBP13765 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DOBP13765 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC006511.3-201ENST00000624929 1783 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC125238.2-201ENST00000430003 1440 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 RNU6-891P-201ENST00000384280 111 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 RN7SKP129-201ENST00000410288 299 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AL139184.1-202ENST00000422303 222 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC007568.1-201ENST00000422912 471 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 GPN3P1-201ENST00000423883 535 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 RN7SL165P-201ENST00000477476 291 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 MRPL57P6-201ENST00000506570 309 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC103968.1-201ENST00000557841 573 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC009120.3-201ENST00000563335 499 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC025283.1-201ENST00000572039 734 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC090079.2-201ENST00000575289 768 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC005332.4-201ENST00000592752 579 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AL049840.6-202ENST00000603373 279 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 SNORA35B-201ENST00000607417 129 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DOBP13765 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DOBP13765 AL138693.1-201ENST00000622219 129 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 AC004836.1-201ENST00000623032 634 ntBASIC5.67□□□□□ -1.5
HLA-DOBP13765 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms