Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC011611.6-201ENST00000547483 255 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AL512310.9-201ENST00000553311 948 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.88□□□□□ -1.31
COL6A2P12110 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.88□□□□□ -1.31
COL6A2P12110 AGGF1P6-201ENST00000569213 976 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.88□□□□□ -1.31
COL6A2P12110 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL6A2P12110 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 AP001153.1-201ENST00000641024 338 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 OR5AU1-204ENST00000641822 1197 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
COL6A2P12110 RPL24P4-201ENST00000326586 421 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL6A2P12110 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.87□□□□□ -1.31
COL6A2P12110 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 ELOBP4-201ENST00000423418 296 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 MTCYBP29-201ENST00000436327 1006 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 RSL24D1P3-201ENST00000449255 495 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 BUD31P2-201ENST00000449374 300 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 AC092155.2-201ENST00000454675 477 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 AC105918.1-201ENST00000474399 838 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 RPL7AP56-201ENST00000476420 791 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 AC134050.1-201ENST00000495088 933 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.87□□□□□ -1.31
COL6A2P12110 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.87□□□□□ -1.31
COL6A2P12110 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.87□□□□□ -1.31
COL6A2P12110 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.87□□□□□ -1.31
COL6A2P12110 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.87□□□□□ -1.31
COL6A2P12110 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.87□□□□□ -1.31
COL6A2P12110 OR7E128P-201ENST00000532736 1024 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.87□□□□□ -1.31
COL6A2P12110 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL6A2P12110 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.87□□□□□ -1.31
COL6A2P12110 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 ZNF92P3-201ENST00000596594 954 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 AC005252.1-201ENST00000604518 1063 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 AP004372.1-201ENST00000604842 844 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 AC091304.6-201ENST00000619761 202 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 FRG1EP-201ENST00000634469 770 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 MAPK10-357ENST00000641831 2858 ntBASIC6.87□□□□□ -1.31
COL6A2P12110 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.87□□□□□ -1.31
COL6A2P12110 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.87□□□□□ -1.31
COL6A2P12110 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.87□□□□□ -1.31
COL6A2P12110 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
COL6A2P12110 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL6A2P12110 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
COL6A2P12110 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.86□□□□□ -1.31
COL6A2P12110 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 ZNF90P1-201ENST00000480493 1951 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC006600.2-201ENST00000624834 2506 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
COL6A2P12110 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.86□□□□□ -1.31
COL6A2P12110 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL6A2P12110 RAB5CP1-201ENST00000395972 580 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.86□□□□□ -1.31
COL6A2P12110 RN7SKP39-201ENST00000410773 322 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 RNU4-64P-201ENST00000410795 131 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC096537.2-201ENST00000413707 714 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 RAB9AP4-201ENST00000415230 609 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 VN1R31P-201ENST00000417498 730 ntBASIC6.86□□□□□ -1.31
COL6A2P12110 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.86□□□□□ -1.31
COL6A2P12110 OSTCP5-201ENST00000425293 453 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms