Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
TOP2AP11388 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC10.52□□□□□ -0.72
TOP2AP11388 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
TOP2AP11388 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC10.52□□□□□ -0.73
TOP2AP11388 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
TOP2AP11388 RNA5SP183-201ENST00000362452 119 ntBASIC10.52□□□□□ -0.73
TOP2AP11388 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
TOP2AP11388 RN7SKP29-201ENST00000410957 272 ntBASIC10.52□□□□□ -0.73
TOP2AP11388 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
TOP2AP11388 MRPL53P1-201ENST00000414323 319 ntBASIC10.52□□□□□ -0.73
TOP2AP11388 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC10.52□□□□□ -0.73
TOP2AP11388 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC10.52□□□□□ -0.73
TOP2AP11388 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC10.52□□□□□ -0.73
TOP2AP11388 BZW1P1-201ENST00000454901 1240 ntBASIC10.52□□□□□ -0.73
TOP2AP11388 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC10.52□□□□□ -0.73
TOP2AP11388 OR4H6P-201ENST00000563771 921 ntBASIC10.52□□□□□ -0.73
TOP2AP11388 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC10.52□□□□□ -0.73
TOP2AP11388 MIR4505-201ENST00000582238 73 ntBASIC10.52□□□□□ -0.73
TOP2AP11388 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC10.52□□□□□ -0.73
TOP2AP11388 AC004948.1-201ENST00000609858 672 ntBASIC10.52□□□□□ -0.73
TOP2AP11388 AL691477.1-201ENST00000624398 162 ntBASIC10.52□□□□□ -0.73
TOP2AP11388 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC10.52□□□□□ -0.73
TOP2AP11388 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC10.52□□□□□ -0.73
TOP2AP11388 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TOP2AP11388 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC10.52□□□□□ -0.73
TOP2AP11388 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
TOP2AP11388 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC10.51□□□□□ -0.73
TOP2AP11388 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 AC022905.1-201ENST00000503430 3048 ntBASIC10.51□□□□□ -0.73
TOP2AP11388 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 U3.7-201ENST00000363668 216 ntBASIC10.51□□□□□ -0.73
TOP2AP11388 AC113412.1-201ENST00000425840 504 ntBASIC10.51□□□□□ -0.73
TOP2AP11388 NPM1P22-201ENST00000427761 952 ntBASIC10.51□□□□□ -0.73
TOP2AP11388 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC10.51□□□□□ -0.73
TOP2AP11388 AL022331.1-201ENST00000429025 477 ntBASIC10.51□□□□□ -0.73
TOP2AP11388 Z84478.1-201ENST00000438230 1219 ntBASIC10.51□□□□□ -0.73
TOP2AP11388 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC10.51□□□□□ -0.73
TOP2AP11388 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC10.51□□□□□ -0.73
TOP2AP11388 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC10.51□□□□□ -0.73
TOP2AP11388 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC10.51□□□□□ -0.73
TOP2AP11388 AL049840.6-201ENST00000604583 345 ntBASIC10.51□□□□□ -0.73
TOP2AP11388 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC10.51□□□□□ -0.73
TOP2AP11388 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
TOP2AP11388 AC061975.7-201ENST00000592016 2692 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TOP2AP11388 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
TOP2AP11388 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
TOP2AP11388 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TOP2AP11388 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TOP2AP11388 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TOP2AP11388 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TOP2AP11388 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC10.5□□□□□ -0.73
TOP2AP11388 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TOP2AP11388 OR2W4P-201ENST00000406496 926 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC10.5□□□□□ -0.73
TOP2AP11388 EEF1A1P29-201ENST00000416082 1096 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC10.5□□□□□ -0.73
TOP2AP11388 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC10.5□□□□□ -0.73
TOP2AP11388 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC10.5□□□□□ -0.73
TOP2AP11388 AC022215.1-201ENST00000481770 362 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC10.5□□□□□ -0.73
TOP2AP11388 OR4A40P-201ENST00000533878 948 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC10.5□□□□□ -0.73
TOP2AP11388 AC007204.2-201ENST00000615022 616 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 AC016769.4-201ENST00000616893 535 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
TOP2AP11388 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC10.5□□□□□ -0.73
TOP2AP11388 PARP4P1-201ENST00000435945 2337 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TOP2AP11388 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TOP2AP11388 FO393409.1-201ENST00000399325 1372 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 AL157831.2-201ENST00000564681 3095 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC10.5□□□□□ -0.73
TOP2AP11388 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
TOP2AP11388 LINC02019-201ENST00000608605 2060 ntBASIC10.5□□□□□ -0.73
TOP2AP11388 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
TOP2AP11388 OR2AT2P-201ENST00000413438 905 ntBASIC10.49□□□□□ -0.73
TOP2AP11388 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC10.49□□□□□ -0.73
TOP2AP11388 RPS4XP5-201ENST00000419038 768 ntBASIC10.49□□□□□ -0.73
TOP2AP11388 RPS12P17-201ENST00000438591 377 ntBASIC10.49□□□□□ -0.73
TOP2AP11388 AL022237.1-201ENST00000446663 358 ntBASIC10.49□□□□□ -0.73
TOP2AP11388 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC10.49□□□□□ -0.73
TOP2AP11388 PFN1P6-201ENST00000476786 399 ntBASIC10.49□□□□□ -0.73
TOP2AP11388 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC10.49□□□□□ -0.73
TOP2AP11388 AP006245.2-201ENST00000522004 300 ntBASIC10.49□□□□□ -0.73
TOP2AP11388 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC10.49□□□□□ -0.73
TOP2AP11388 MIR4700-201ENST00000578311 74 ntBASIC10.49□□□□□ -0.73
TOP2AP11388 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC10.49□□□□□ -0.73
TOP2AP11388 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC10.49□□□□□ -0.73
TOP2AP11388 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC10.49□□□□□ -0.73
TOP2AP11388 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
TOP2AP11388 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TOP2AP11388 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms