Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
VTNP04004 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTNP04004 AC062029.1-202ENST00000606164 3651 ntBASIC6.81□□□□□ -1.32
VTNP04004 OR7E25P-201ENST00000344844 931 ntBASIC6.81□□□□□ -1.32
VTNP04004 RNA5SP477-201ENST00000362639 119 ntBASIC6.81□□□□□ -1.32
VTNP04004 SUGT1P2-201ENST00000379452 992 ntBASIC6.81□□□□□ -1.32
VTNP04004 HMGN1P20-201ENST00000411849 300 ntBASIC6.81□□□□□ -1.32
VTNP04004 RPS3P2-201ENST00000421346 701 ntBASIC6.81□□□□□ -1.32
VTNP04004 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 SEPT14P12-201ENST00000442280 560 ntBASIC6.81□□□□□ -1.32
VTNP04004 AL359839.1-201ENST00000451975 1160 ntBASIC6.81□□□□□ -1.32
VTNP04004 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.81□□□□□ -1.32
VTNP04004 LDHBP3-201ENST00000514909 822 ntBASIC6.81□□□□□ -1.32
VTNP04004 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.81□□□□□ -1.32
VTNP04004 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.81□□□□□ -1.32
VTNP04004 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.81□□□□□ -1.32
VTNP04004 AC068305.2-201ENST00000550567 1205 ntBASIC6.81□□□□□ -1.32
VTNP04004 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 AL513218.1-201ENST00000606527 391 ntBASIC6.81□□□□□ -1.32
VTNP04004 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 AC119674.1-217ENST00000641942 1086 ntBASIC6.81□□□□□ -1.32
VTNP04004 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTNP04004 AC024651.2-201ENST00000562480 2098 ntBASIC6.81□□□□□ -1.32
VTNP04004 CASC19-238ENST00000641523 1558 ntBASIC6.81□□□□□ -1.32
VTNP04004 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.81□□□□□ -1.32
VTNP04004 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
VTNP04004 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTNP04004 AC011416.1-201ENST00000514947 1732 ntBASIC6.81□□□□□ -1.32
VTNP04004 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VTNP04004 AC092821.2-201ENST00000545710 2042 ntBASIC6.81□□□□□ -1.32
VTNP04004 RBMY1HP-201ENST00000382759 1389 ntBASIC6.81□□□□□ -1.32
VTNP04004 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VTNP04004 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VTNP04004 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.81□□□□□ -1.32
VTNP04004 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 AL031123.3-201ENST00000623345 1837 ntBASIC6.8□□□□□ -1.32
VTNP04004 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.8□□□□□ -1.32
VTNP04004 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 AC007406.5-201ENST00000570140 3170 ntBASIC6.8□□□□□ -1.32
VTNP04004 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 AL589993.1-201ENST00000407450 2524 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC061975.7-201ENST00000592016 2692 ntBASIC6.8□□□□□ -1.32
VTNP04004 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
VTNP04004 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.8□□□□□ -1.32
VTNP04004 RNFT1P3-201ENST00000340898 1052 ntBASIC6.8□□□□□ -1.32
VTNP04004 RNA5SP273-201ENST00000362484 113 ntBASIC6.8□□□□□ -1.32
VTNP04004 MIR433-201ENST00000384837 93 ntBASIC6.8□□□□□ -1.32
VTNP04004 NAP1L4P2-201ENST00000425958 899 ntBASIC6.8□□□□□ -1.32
VTNP04004 CDY8P-201ENST00000428380 1279 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 CDY20P-201ENST00000447528 1279 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC084754.1-201ENST00000463466 464 ntBASIC6.8□□□□□ -1.32
VTNP04004 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 AC024587.1-201ENST00000505925 2157 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.8□□□□□ -1.32
VTNP04004 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.8□□□□□ -1.32
VTNP04004 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.8□□□□□ -1.32
VTNP04004 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 AC007956.1-201ENST00000555623 542 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.8□□□□□ -1.32
VTNP04004 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.8□□□□□ -1.32
VTNP04004 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.8□□□□□ -1.32
VTNP04004 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.8□□□□□ -1.32
VTNP04004 AC008555.7-201ENST00000605008 583 ntBASIC6.8□□□□□ -1.32
VTNP04004 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 AL445649.1-201ENST00000615941 691 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC091305.2-201ENST00000624049 1576 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC092724.1-201ENST00000624623 3397 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.8□□□□□ -1.32
VTNP04004 AC129915.3-201ENST00000634128 948 ntBASIC6.8□□□□□ -1.32
VTNP04004 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.8□□□□□ -1.32
VTNP04004 AL033543.1-201ENST00000623440 13454 ntBASIC6.8□□□□□ -1.32
VTNP04004 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTNP04004 AC005618.1-201ENST00000606901 3148 ntBASIC6.8□□□□□ -1.32
VTNP04004 AC092725.2-201ENST00000567658 1389 ntBASIC6.8□□□□□ -1.32
VTNP04004 AP001541.1-201ENST00000623322 1904 ntBASIC6.8□□□□□ -1.32
VTNP04004 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
VTNP04004 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.8□□□□□ -1.32
VTNP04004 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms