Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 AC090181.3-201ENST00000624777 1514 ntBASIC6.61□□□□□ -1.35
APOEP02649 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.61□□□□□ -1.35
APOEP02649 AC119674.1-213ENST00000641177 1386 ntBASIC6.61□□□□□ -1.35
APOEP02649 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.61□□□□□ -1.35
APOEP02649 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
APOEP02649 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.61□□□□□ -1.35
APOEP02649 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 OR2W4P-201ENST00000406496 926 ntBASIC6.61□□□□□ -1.35
APOEP02649 RNA5SP115-201ENST00000411160 107 ntBASIC6.61□□□□□ -1.35
APOEP02649 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.61□□□□□ -1.35
APOEP02649 AK3P5-201ENST00000432033 519 ntBASIC6.61□□□□□ -1.35
APOEP02649 AC010086.1-201ENST00000437359 1052 ntBASIC6.61□□□□□ -1.35
APOEP02649 CXCR2P1-202ENST00000443392 1074 ntBASIC6.61□□□□□ -1.35
APOEP02649 POU5F1P5-201ENST00000445059 658 ntBASIC6.61□□□□□ -1.35
APOEP02649 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.61□□□□□ -1.35
APOEP02649 RARRES2P3-201ENST00000457739 473 ntBASIC6.61□□□□□ -1.35
APOEP02649 RN7SL369P-201ENST00000477138 299 ntBASIC6.61□□□□□ -1.35
APOEP02649 AL117692.1-201ENST00000494283 713 ntBASIC6.61□□□□□ -1.35
APOEP02649 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.61□□□□□ -1.35
APOEP02649 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.61□□□□□ -1.35
APOEP02649 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.61□□□□□ -1.35
APOEP02649 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.61□□□□□ -1.35
APOEP02649 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.61□□□□□ -1.35
APOEP02649 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.61□□□□□ -1.35
APOEP02649 AC009729.1-201ENST00000548873 1133 ntBASIC6.61□□□□□ -1.35
APOEP02649 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.61□□□□□ -1.35
APOEP02649 AC233702.7-202ENST00000582941 211 ntBASIC6.61□□□□□ -1.35
APOEP02649 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.61□□□□□ -1.35
APOEP02649 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 AL136984.1-201ENST00000607611 1893 ntBASIC6.61□□□□□ -1.35
APOEP02649 AL662795.2-201ENST00000624252 3706 ntBASIC6.61□□□□□ -1.35
APOEP02649 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.61□□□□□ -1.35
APOEP02649 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
APOEP02649 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
APOEP02649 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
APOEP02649 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
APOEP02649 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 U3.43-201ENST00000410734 213 ntBASIC6.6□□□□□ -1.35
APOEP02649 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.6□□□□□ -1.35
APOEP02649 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.6□□□□□ -1.35
APOEP02649 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 SNX18P26-201ENST00000458433 740 ntBASIC6.6□□□□□ -1.35
APOEP02649 RN7SL552P-201ENST00000462094 276 ntBASIC6.6□□□□□ -1.35
APOEP02649 OR51A1P-201ENST00000511110 946 ntBASIC6.6□□□□□ -1.35
APOEP02649 RN7SKP183-201ENST00000517169 324 ntBASIC6.6□□□□□ -1.35
APOEP02649 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.6□□□□□ -1.35
APOEP02649 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.6□□□□□ -1.35
APOEP02649 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.6□□□□□ -1.35
APOEP02649 AC005632.2-201ENST00000564271 828 ntBASIC6.6□□□□□ -1.35
APOEP02649 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.6□□□□□ -1.35
APOEP02649 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.6□□□□□ -1.35
APOEP02649 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.6□□□□□ -1.35
APOEP02649 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.6□□□□□ -1.35
APOEP02649 OR7E91P-202ENST00000642062 1198 ntBASIC6.6□□□□□ -1.35
APOEP02649 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
APOEP02649 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.6□□□□□ -1.35
APOEP02649 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
APOEP02649 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.59□□□□□ -1.35
APOEP02649 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
APOEP02649 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
APOEP02649 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
APOEP02649 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
APOEP02649 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
APOEP02649 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
APOEP02649 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.59□□□□□ -1.35
APOEP02649 SNORD8-201ENST00000363915 110 ntBASIC6.59□□□□□ -1.35
APOEP02649 RNA5SP478-201ENST00000364657 115 ntBASIC6.59□□□□□ -1.35
APOEP02649 MTND2P12-201ENST00000417560 1252 ntBASIC6.59□□□□□ -1.35
APOEP02649 RPL7AP14-201ENST00000424041 802 ntBASIC6.59□□□□□ -1.35
APOEP02649 AC099782.1-201ENST00000425889 474 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms