Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 Mico1.1-201ENST00000611698 204 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
SPTA1P02549 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SPTA1P02549 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SPTA1P02549 SDHDP6-201ENST00000414693 480 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.76□□□□□ -1.49
SPTA1P02549 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.76□□□□□ -1.49
SPTA1P02549 RPL5P14-201ENST00000494197 878 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 RNA5SP92-201ENST00000516437 110 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.76□□□□□ -1.49
SPTA1P02549 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 SNORA70D-201ENST00000578836 135 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 AP005119.1-201ENST00000580956 292 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.76□□□□□ -1.49
SPTA1P02549 AL356986.1-201ENST00000604085 341 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.76□□□□□ -1.49
SPTA1P02549 AL023806.3-201ENST00000638502 2704 ntBASIC5.76□□□□□ -1.49
SPTA1P02549 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SPTA1P02549 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.76□□□□□ -1.49
SPTA1P02549 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.75□□□□□ -1.49
SPTA1P02549 AC245060.4-201ENST00000413293 1121 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.75□□□□□ -1.49
SPTA1P02549 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.75□□□□□ -1.49
SPTA1P02549 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.75□□□□□ -1.49
SPTA1P02549 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC5.75□□□□□ -1.49
SPTA1P02549 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 AC087565.3-203ENST00000641018 837 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC5.75□□□□□ -1.49
SPTA1P02549 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.75□□□□□ -1.49
SPTA1P02549 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.75□□□□□ -1.49
SPTA1P02549 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
SPTA1P02549 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 TMSB4XP2-201ENST00000335179 210 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 AL807761.1-201ENST00000417622 171 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.75□□□□□ -1.49
SPTA1P02549 OR3D1P-201ENST00000438288 955 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 DNAJB5P1-201ENST00000454004 806 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.75□□□□□ -1.49
SPTA1P02549 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 AC026367.2-201ENST00000610630 553 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 AP000550.3-201ENST00000637734 379 ntBASIC5.75□□□□□ -1.49
SPTA1P02549 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SPTA1P02549 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.75□□□□□ -1.49
SPTA1P02549 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SPTA1P02549 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 AC087501.5-201ENST00000607496 2374 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms