Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.07□□□□□ -1.44
PDLIM1O00151 SNX18P23-201ENST00000510867 677 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.07□□□□□ -1.44
PDLIM1O00151 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 AC027026.1-201ENST00000532323 742 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC027216.1-201ENST00000577726 685 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 RN7SL270P-201ENST00000579643 281 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 MIR6774-201ENST00000614651 70 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC073857.1-201ENST00000625082 1054 ntBASIC6.07□□□□□ -1.44
PDLIM1O00151 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDLIM1O00151 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDLIM1O00151 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM1O00151 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM1O00151 AC027279.4-201ENST00000624371 2072 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 OR9K1P-202ENST00000641111 3217 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
PDLIM1O00151 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 BIN2P1-201ENST00000504996 1530 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AC011416.1-201ENST00000514947 1732 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 RNA5SP152-201ENST00000365184 110 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM1O00151 RN7SKP296-201ENST00000411185 341 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 CYCSP52-201ENST00000422857 310 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 GAPDHP57-201ENST00000424400 585 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 ETF1P1-206ENST00000427296 984 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AL663074.2-201ENST00000440621 479 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM1O00151 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.06□□□□□ -1.44
PDLIM1O00151 AC103563.5-201ENST00000455643 364 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM1O00151 RN7SL372P-201ENST00000461982 298 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 RN7SL216P-201ENST00000471607 298 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 RPS26P6-201ENST00000475156 348 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AC021146.11-201ENST00000503319 491 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM1O00151 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.06□□□□□ -1.44
PDLIM1O00151 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM1O00151 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.06□□□□□ -1.44
PDLIM1O00151 PPIAP6-201ENST00000557078 499 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM1O00151 NPM1P42-201ENST00000560329 862 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 OR4H6P-201ENST00000563771 921 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM1O00151 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM1O00151 AC233702.7-202ENST00000582941 211 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.06□□□□□ -1.44
PDLIM1O00151 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM1O00151 AC005277.2-201ENST00000617898 390 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AP001264.1-201ENST00000620602 703 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AL138693.1-201ENST00000622219 129 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AC114546.4-201ENST00000624413 369 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM1O00151 AC135068.11-201ENST00000636378 921 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.06□□□□□ -1.44
PDLIM1O00151 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PDLIM1O00151 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM1O00151 AC095038.1-201ENST00000429248 1591 ntBASIC6.06□□□□□ -1.44
PDLIM1O00151 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
PDLIM1O00151 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 AL136984.1-201ENST00000607611 1893 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM1O00151 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PDLIM1O00151 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDLIM1O00151 RN7SKP189-201ENST00000365042 330 ntBASIC6.05□□□□□ -1.44
PDLIM1O00151 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.05□□□□□ -1.44
PDLIM1O00151 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms