Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AP004289.1-201ENST00000436307 2205 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 CASC19-246ENST00000641625 1606 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AC005725.1-201ENST00000577346 2607 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 RNU1-49P-201ENST00000363468 159 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 OSTCP4-201ENST00000424397 449 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 RPS19P6-201ENST00000441327 433 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 GAPDHP23-201ENST00000444823 993 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 RBMY2HP-201ENST00000457961 720 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 CASP1P2-201ENST00000526830 1258 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AP001858.2-201ENST00000536213 601 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 HMGN1P26-201ENST00000558737 303 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 AC022001.1-201ENST00000605193 268 ntBASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS29Q9UBQ0 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AL121768.1-201ENST00000613917 2544 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 YWHAZP4-201ENST00000392459 708 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AL157702.1-201ENST00000398764 426 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 RPL23AP17-201ENST00000401064 499 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AL354707.3-201ENST00000427308 331 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 RAB28P2-201ENST00000454299 641 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AL445687.2-201ENST00000458156 728 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 SNX18P24-201ENST00000505249 671 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC113191.1-201ENST00000517759 403 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC008429.4-201ENST00000521201 182 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 MIR3157-201ENST00000578688 85 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 RN7SL66P-201ENST00000582099 264 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC020916.2-201ENST00000591242 360 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC063977.7-201ENST00000594454 337 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 MIR6774-201ENST00000614651 70 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AL137067.2-201ENST00000621202 131 ntBASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS29Q9UBQ0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms