Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CR383658.1-201ENST00000514609 734 ntBASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 RN7SKP238-201ENST00000516483 249 ntBASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 AC068305.2-201ENST00000550567 1205 ntBASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 RN7SL753P-201ENST00000581238 290 ntBASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 AL096712.1-201ENST00000614561 159 ntBASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
KIAA1549Q9HCM3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 LRRC37A9P-201ENST00000603850 5376 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 CCNT2P1-201ENST00000423082 1315 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AP003486.1-201ENST00000525716 3994 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 FAM32BP-201ENST00000344033 333 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 HMGN1P20-201ENST00000411849 300 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC017035.1-201ENST00000411999 1115 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 IPPKP1-201ENST00000422501 768 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 RPL12P31-201ENST00000478433 450 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC079315.1-201ENST00000602952 623 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AP001885.1-201ENST00000621658 558 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 FO681491.1-202ENST00000623392 737 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC105235.1-201ENST00000623208 1816 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 Z93929.1-201ENST00000418200 1475 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC093225.1-201ENST00000506867 1408 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AP000547.3-204ENST00000588548 2523 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC096921.2-201ENST00000561507 1916 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AL137918.1-201ENST00000624542 1922 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 AC091305.2-201ENST00000624049 1576 ntBASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KIAA1549Q9HCM3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 PPIAP10-201ENST00000438675 458 ntBASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 RBMY2AP-201ENST00000445405 1157 ntBASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 RBMY2CP-201ENST00000448575 1157 ntBASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 RBMY2DP-202ENST00000448881 1157 ntBASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 RBMY2BP-202ENST00000451071 1156 ntBASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 Y_RNA.710-201ENST00000516975 110 ntBASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC027369.2-201ENST00000528030 440 ntBASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.56□□□□□ -1.52
KIAA1549Q9HCM3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms