Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 FAM32BP-201ENST00000344033 333 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 OR11H13P-201ENST00000359695 979 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC023194.2-201ENST00000465398 406 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC094085.1-201ENST00000468914 584 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC090958.1-201ENST00000511122 351 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC021269.1-201ENST00000526860 705 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 LINC00556-201ENST00000569603 412 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC108865.2-201ENST00000606881 432 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AP001962.1-201ENST00000624114 559 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC008627.1-201ENST00000517511 1704 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 TMEM75-201ENST00000624314 2165 ntBASIC6.75□□□□□ -1.33
NXF3Q9H4D5 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NXF3Q9H4D5 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 RNU1-134P-201ENST00000362935 165 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 RNA5SP350-201ENST00000363298 111 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 SNORA43.1-201ENST00000364863 140 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AL132875.1-201ENST00000403623 949 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC066692.1-201ENST00000421721 457 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 ATP5LP2-201ENST00000440646 311 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC016908.1-201ENST00000442571 1219 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC025458.1-201ENST00000506046 166 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 PRMT5P1-201ENST00000514351 598 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 TRIM51DP-201ENST00000529746 596 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC024884.1-201ENST00000620583 399 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 OR7A1P-202ENST00000641542 1158 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC061975.7-201ENST00000592016 2692 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 LCOR-201ENST00000286067 4542 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 AC005618.1-201ENST00000606901 3148 ntBASIC6.74□□□□□ -1.33
NXF3Q9H4D5 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NXF3Q9H4D5 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 PARP4P1-201ENST00000435945 2337 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms