Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC026523.2-201ENST00000625039 7739 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 SP110-215ENST00000540870 2032 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ASNSP1-204ENST00000641977 1664 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AC015871.3-201ENST00000618835 2261 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ZNF507-202ENST00000355898 3194 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 KYNUP2-201ENST00000582280 1329 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AC092326.2-201ENST00000624772 1561 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL031985.3-201ENST00000565390 2449 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 HMHB1-201ENST00000289448 384 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 OR4K15-201ENST00000305051 1216 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 BPNT1-202ENST00000354807 1152 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 KITLG-203ENST00000357116 565 ntTSL 4 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 Y_RNA.38-201ENST00000362617 102 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 Y_RNA.97-201ENST00000363094 102 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 SNORA62.2-201ENST00000364672 152 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 RNU6-534P-201ENST00000364877 106 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 PPP1R32-202ENST00000366212 488 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CENPW-201ENST00000368325 528 ntTSL 3 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 SETDB1-203ENST00000368963 1045 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 OR52E6-202ENST00000379946 954 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 RNU6-723P-201ENST00000383973 107 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 RNU6-1103P-201ENST00000384150 107 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 Y_RNA.509-201ENST00000384506 99 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 TRDV2-201ENST00000390469 520 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 IGHV1-2-201ENST00000390594 417 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 SNORA48B-201ENST00000390912 135 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 LDHAP4-201ENST00000397561 998 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL137792.1-201ENST00000399029 557 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 GSTA9P-201ENST00000406231 611 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 PRELID1P2-201ENST00000407805 396 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AC008267.2-201ENST00000411606 981 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL023773.2-201ENST00000412173 1005 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 STPG3-202ENST00000412566 1191 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 HMGB3P23-201ENST00000414981 585 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL117350.1-201ENST00000418348 640 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 RPL21P111-201ENST00000418453 477 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL121878.1-201ENST00000418638 859 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AC083875.1-201ENST00000419509 405 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 PHKA1P1-201ENST00000420457 621 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL355863.1-201ENST00000424331 293 ntBASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.25□□□□□ -2.05
LCE3DQ9BYE3 AL365356.4-201ENST00000425246 613 ntTSL 3 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms