Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 RNA5SP110-201ENST00000362638 115 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 RNA5SP346-201ENST00000363541 121 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 SNORA77.2-201ENST00000408571 112 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 RPL34P27-201ENST00000428810 349 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 SOCS5P1-201ENST00000440415 949 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AL445991.1-201ENST00000450381 475 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC019084.1-201ENST00000457337 432 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 RN7SL326P-201ENST00000477493 296 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 CYP4F27P-201ENST00000514557 494 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 RN7SKP248-201ENST00000516278 305 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC135983.3-201ENST00000528049 1226 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 OR4A6P-201ENST00000534364 970 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 BTG1P1-201ENST00000540396 508 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 MIR4310-201ENST00000582950 57 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC004890.3-201ENST00000605566 1095 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 MIR6503-201ENST00000622884 86 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 CCNT2P1-201ENST00000423082 1315 ntBASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO3Q9BXY4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 GNG5P2-201ENST00000372054 207 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 MIR191-201ENST00000384873 92 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 MTND2P12-201ENST00000417560 1252 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC016027.5-201ENST00000427227 210 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC092601.1-201ENST00000444526 383 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 RN7SL39P-201ENST00000462264 297 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 RN7SL104P-201ENST00000498686 293 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 RNA5SP434-201ENST00000516647 121 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 RNA5SP400-201ENST00000517155 111 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC025283.1-201ENST00000572039 734 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 MIR3157-201ENST00000578688 85 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 DYNLL1P1-201ENST00000595442 269 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 RN7SL261P-201ENST00000613441 282 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC068213.1-201ENST00000625124 226 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 AC009779.8-201ENST00000641684 4384 ntBASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO3Q9BXY4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms