Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC091544.5-201ENST00000620192 3815 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC092104.1-201ENST00000497346 1441 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 SNORD46-201ENST00000364043 104 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 U3.14-201ENST00000365363 227 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 RN7SKP263-201ENST00000411194 309 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 RPL34P19-201ENST00000415903 342 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 RPF2P1-201ENST00000424137 906 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 VN1R42P-201ENST00000424651 344 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 FDPSP1-201ENST00000424976 1071 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AL138479.1-201ENST00000426913 484 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC073900.1-201ENST00000429766 776 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 MRPS10P2-201ENST00000431226 381 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 FECHP1-201ENST00000431896 1214 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 ANKRD54P1-201ENST00000433115 471 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 OSTCP1-201ENST00000455507 450 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 RN7SKP198-201ENST00000459286 306 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC005410.1-202ENST00000460347 485 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 RPL9P15-201ENST00000491096 532 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 RPS12P31-201ENST00000491419 398 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 OR7E163P-201ENST00000505943 894 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 OR4C1P-201ENST00000530880 937 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 OR5F2P-201ENST00000532761 941 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 EEF1B2P4-201ENST00000551398 348 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 ACTR3BP3-201ENST00000565577 979 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 RN7SL42P-201ENST00000579786 294 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC079880.2-201ENST00000603790 1213 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC024085.1-201ENST00000604299 432 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC005070.2-201ENST00000604391 260 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AL163642.2-201ENST00000604722 1019 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC012409.3-201ENST00000611343 981 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC022079.2-201ENST00000619739 566 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 MIR8089-201ENST00000620165 82 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 AC022743.1-201ENST00000624990 664 ntBASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.1□□□□□ -1.43
SSBP3Q9BWW4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms