Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 RAD1P1-201ENST00000231383 813 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC010894.1-201ENST00000313760 361 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 STAG3L4-201ENST00000352103 530 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 RN7SKP130-201ENST00000364924 301 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 Y_RNA.599-201ENST00000410489 109 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 RPS3AP44-201ENST00000425466 790 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AL392003.1-201ENST00000434394 243 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 RPS26P11-201ENST00000463445 348 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 RPS3AP49-201ENST00000472161 790 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 RPS26P6-201ENST00000475156 348 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 RPL23AP8-201ENST00000479812 475 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AP005202.1-201ENST00000489915 867 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 HMGB1P47-201ENST00000511281 589 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 RNA5SP318-201ENST00000516352 92 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AP001207.2-201ENST00000519490 539 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 LRRC6P1-201ENST00000532188 885 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 SAA3P-201ENST00000533267 365 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 TOMM20P1-201ENST00000534518 427 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 OR5BK1P-201ENST00000550421 823 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC109446.2-201ENST00000567872 497 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 SNX6P1-201ENST00000601728 1224 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AL645927.2-201ENST00000618350 349 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 MIR6806-201ENST00000622141 64 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC079298.2-201ENST00000623885 459 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 AC017037.3-201ENST00000625016 472 ntBASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.98□□□□□ -1.13
SYNGAP1Q96PV0 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 SNORD116-4-201ENST00000384733 96 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 CDC42P6-201ENST00000421246 576 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC000089.1-201ENST00000424559 801 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC018804.1-201ENST00000430381 618 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 XKRY2-201ENST00000442362 1093 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC118758.1-202ENST00000454719 225 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 RN7SL70P-201ENST00000478322 302 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ST13P12-201ENST00000508958 1094 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC108043.1-201ENST00000512696 574 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC120036.3-201ENST00000517826 292 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms