Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 AC096921.2-201ENST00000561507 1916 ntBASIC8.7□□□□□ -1.02
CCDC7Q96M83 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC7Q96M83 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC7Q96M83 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC7Q96M83 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC7Q96M83 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC7Q96M83 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC7Q96M83 RN7SKP206-201ENST00000410823 293 ntBASIC8.7□□□□□ -1.02
CCDC7Q96M83 AC104843.2-201ENST00000427666 297 ntBASIC8.7□□□□□ -1.02
CCDC7Q96M83 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 AC010240.2-201ENST00000445363 1205 ntBASIC8.7□□□□□ -1.02
CCDC7Q96M83 VPS25P1-201ENST00000455691 508 ntBASIC8.7□□□□□ -1.02
CCDC7Q96M83 AL022319.1-201ENST00000458183 1167 ntBASIC8.7□□□□□ -1.02
CCDC7Q96M83 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 AC073389.3-201ENST00000609434 935 ntBASIC8.7□□□□□ -1.02
CCDC7Q96M83 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC7Q96M83 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CCDC7Q96M83 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.7□□□□□ -1.02
CCDC7Q96M83 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC7Q96M83 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC7Q96M83 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC7Q96M83 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC7Q96M83 ZNF812P-201ENST00000457674 1694 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 RNU1-49P-201ENST00000363468 159 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 AC093719.1-201ENST00000480427 441 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 RN7SL104P-201ENST00000498686 293 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 OR7E99P-201ENST00000505750 922 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 KHDC1P1-201ENST00000511053 508 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 RN7SKP35-201ENST00000517210 151 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC7Q96M83 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC7Q96M83 AC008507.3-201ENST00000585753 472 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 AC003992.1-201ENST00000635364 557 ntBASIC8.69□□□□□ -1.02
CCDC7Q96M83 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC7Q96M83 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CCDC7Q96M83 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CCDC7Q96M83 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 LYARP1-201ENST00000436977 1501 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 SNORA70H-201ENST00000383910 135 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 SNORA70J-201ENST00000384182 135 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 AL512422.1-201ENST00000407033 553 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 RNA5SP251-201ENST00000410614 137 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 GAPDHP23-201ENST00000444823 993 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 SNX18P24-201ENST00000505249 671 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 OR6M2P-201ENST00000529831 871 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 AC036111.2-201ENST00000533247 901 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 NPIPB1P-202ENST00000588786 828 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 AC022106.1-201ENST00000612834 766 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 AL137067.2-201ENST00000621202 131 ntBASIC8.68□□□□□ -1.02
CCDC7Q96M83 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.68□□□□□ -1.02
CCDC7Q96M83 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CCDC7Q96M83 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 KARSP1-201ENST00000451871 1752 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
CCDC7Q96M83 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.67□□□□□ -1.02
CCDC7Q96M83 AC015977.1-201ENST00000418887 292 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 RPS3P2-201ENST00000421346 701 ntBASIC8.67□□□□□ -1.02
CCDC7Q96M83 AC066692.1-201ENST00000421721 457 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms