Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC016251.2-201ENST00000623393 3089 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 SALL4P7-201ENST00000555779 3120 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AL445466.1-201ENST00000448432 357 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AL672167.3-201ENST00000465951 960 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 GAPDHP71-201ENST00000511530 1003 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 MIR6837-201ENST00000620884 64 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC026951.1-201ENST00000559530 2459 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC093829.1-201ENST00000506662 1618 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 RN7SKP128-201ENST00000364270 303 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 RBMY2KP-201ENST00000418221 992 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 RPL21P133-201ENST00000443666 476 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC092824.1-201ENST00000483524 576 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AL512329.2-201ENST00000607350 548 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AL096829.1-201ENST00000413677 457 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 NME1P1-201ENST00000420914 382 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 OR7E116P-201ENST00000448529 957 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC100832.1-201ENST00000471945 383 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC026826.1-201ENST00000493002 361 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 SUMO2P7-201ENST00000511179 285 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CYCSP22-201ENST00000517555 339 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 AC126915.2-201ENST00000610957 190 ntBASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ALMS1Q8TCU4 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 OR11H13P-201ENST00000359695 979 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC023818.1-201ENST00000498379 384 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC018552.1-201ENST00000562099 811 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 TXNP4-201ENST00000575018 310 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AP001496.3-201ENST00000580230 913 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AL645933.2-201ENST00000606743 1207 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 RN7SL544P-201ENST00000617232 284 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AC005840.5-201ENST00000619166 599 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 RN7SL763P-201ENST00000620922 284 ntBASIC4.1□□□□□ -1.75
ALMS1Q8TCU4 AP001784.1-201ENST00000624107 428 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms