Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC068137.1-201ENST00000429272 584 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AL121776.1-201ENST00000429337 372 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC002366.1-201ENST00000446186 1190 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RAB28P3-201ENST00000448325 597 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RPL7P31-201ENST00000450192 724 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC092569.1-201ENST00000455192 258 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RPL3P10-201ENST00000476002 1164 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 CCDC11P1-201ENST00000503137 1162 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC122718.2-201ENST00000505325 591 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 OR4A12P-201ENST00000530847 918 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC105275.2-201ENST00000567907 711 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC116312.1-201ENST00000606841 314 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC084876.1-201ENST00000612793 641 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AC245033.3-201ENST00000617986 224 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AL589666.2-201ENST00000624603 618 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 CCT4P2-201ENST00000233836 1548 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 CR383658.2-201ENST00000547576 1525 ntBASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCUBE3Q8IX30 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.04
SCUBE3Q8IX30 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC108099.1-201ENST00000564402 3258 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 SYF2-202ENST00000354361 926 ntTSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 RNU6-254P-201ENST00000363377 107 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 Y_RNA.216-201ENST00000364205 93 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 SNORA4.1-201ENST00000364263 144 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AL391422.1-201ENST00000402155 436 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC066692.1-201ENST00000421721 457 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AL645936.2-201ENST00000430565 928 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 CLUHP5-201ENST00000438421 774 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 HMGB3P9-201ENST00000441799 583 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 RPS3AP49-201ENST00000472161 790 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 IGBP1P4-201ENST00000503202 879 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 RNA5SP101-201ENST00000517036 108 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 MIR4258-201ENST00000580920 91 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AC233280.2-201ENST00000603917 1070 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 AL359880.1-201ENST00000621879 266 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 RHOXF1P2-201ENST00000635431 502 ntBASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCUBE3Q8IX30 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms