Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC026108.1-201ENST00000635444 547 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 CASC19-261ENST00000641853 1638 ntBASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD4Q6ZW05 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC119674.1-213ENST00000641177 1386 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC020658.2-201ENST00000559030 4020 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC027279.1-201ENST00000568885 4284 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 RNA5SP442-201ENST00000365050 107 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 ATP5F1P6-201ENST00000402768 767 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 FTH1P26-201ENST00000406512 701 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 RN7SKP199-201ENST00000410325 305 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC007365.2-201ENST00000428806 458 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 MED28P4-201ENST00000433137 572 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 NMNAT1P3-201ENST00000457517 888 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC079193.1-201ENST00000460497 588 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC126615.1-201ENST00000470084 630 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 TUBBP11-201ENST00000472255 252 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 RPEP1-201ENST00000504507 658 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 KCTD9P6-201ENST00000522306 950 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AP001646.2-201ENST00000528645 1156 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC023310.2-201ENST00000553844 547 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC026458.1-201ENST00000564330 438 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 EXOSC3P2-201ENST00000594464 497 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 RNU6-84P-201ENST00000607737 102 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC004839.1-201ENST00000610269 501 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AL137246.2-201ENST00000613439 662 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 AC008626.2-201ENST00000624425 248 ntBASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD4Q6ZW05 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTCHD4Q6ZW05 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTCHD4Q6ZW05 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTCHD4Q6ZW05 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTCHD4Q6ZW05 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.09□□□□□ -1.44
PTCHD4Q6ZW05 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
PTCHD4Q6ZW05 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.09□□□□□ -1.44
PTCHD4Q6ZW05 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 AC010401.2-201ENST00000575137 4934 ntBASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 CASC19-228ENST00000641414 1684 ntBASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 MTHFD2P5-201ENST00000320415 844 ntBASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 AC023886.2-201ENST00000321285 411 ntBASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 RNU1-46P-201ENST00000384425 164 ntBASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 AL049697.3-201ENST00000406493 982 ntBASIC6.08□□□□□ -1.44
PTCHD4Q6ZW05 MIR1231-201ENST00000408101 92 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms