Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.54□□□□□ -1.36
PTPN20Q4JDL3 WBP11P1-201ENST00000562560 1931 ntBASIC6.54□□□□□ -1.36
PTPN20Q4JDL3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTPN20Q4JDL3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.54□□□□□ -1.36
PTPN20Q4JDL3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTPN20Q4JDL3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC009831.5-201ENST00000624000 3189 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC121334.1-201ENST00000396414 802 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AL139805.1-201ENST00000407837 289 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AL035422.1-201ENST00000414193 397 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AL645936.1-201ENST00000441979 518 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC079922.1-201ENST00000443291 359 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AL590004.3-202ENST00000445883 451 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC112187.1-201ENST00000455837 479 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 OR6M2P-201ENST00000529831 871 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AP005136.2-201ENST00000583253 1049 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC020916.2-201ENST00000591242 360 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AC116667.2-201ENST00000641075 823 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 AL669831.5-218ENST00000591702 1873 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 MAPK10-270ENST00000641102 3538 ntBASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN20Q4JDL3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
PTPN20Q4JDL3 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.36
PTPN20Q4JDL3 AC024587.1-201ENST00000505925 2157 ntBASIC6.52□□□□□ -1.36
PTPN20Q4JDL3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.52□□□□□ -1.36
PTPN20Q4JDL3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 CCNT2P1-201ENST00000423082 1315 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 RNA5SP110-201ENST00000362638 115 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 RN7SKP237-201ENST00000364663 301 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AC099782.1-201ENST00000425889 474 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 GAPDHP59-201ENST00000435908 267 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 MARK2P8-201ENST00000476069 952 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 OR7E22P-201ENST00000478335 1035 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 RPL9P15-201ENST00000491096 532 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AL078601.3-201ENST00000573303 535 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AC008555.7-201ENST00000605008 583 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AL080312.2-201ENST00000613001 630 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AC024651.2-201ENST00000562480 2098 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 AC011416.1-201ENST00000514947 1732 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 HSPD1P8-201ENST00000400121 1658 ntBASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PTPN20Q4JDL3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms