Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC117382.2-201ENST00000564748 3151 ntBASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 AL391666.1-201ENST00000442570 2764 ntBASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 AC087045.3-201ENST00000623046 2468 ntBASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RSPO4Q2I0M5 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AL121936.1-201ENST00000641660 2884 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AL162632.3-201ENST00000566976 1625 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 CASC19-238ENST00000641523 1558 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MTCO1P18-201ENST00000455518 1419 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 U3.4-201ENST00000363352 213 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 RNU1-65P-201ENST00000363919 148 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 SNORD94-201ENST00000386037 137 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AL603865.2-201ENST00000401679 213 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MIR1302-11-201ENST00000408051 138 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MIR1302-9-201ENST00000408365 138 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MIR1302-10-201ENST00000408734 138 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 YWHAZP3-201ENST00000415292 738 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC091492.1-201ENST00000419844 272 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MTND2P23-201ENST00000422990 651 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC000111.3-201ENST00000433478 193 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 GCNT1P5-201ENST00000449274 682 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 TDGF1P6-201ENST00000463873 448 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 RPS6P4-201ENST00000494693 758 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 TECRP2-201ENST00000503270 928 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC114324.2-202ENST00000503812 134 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC122718.2-201ENST00000505325 591 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MTATP6P22-201ENST00000507369 598 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 IGHVIV-44-1-201ENST00000519334 338 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AP004833.3-201ENST00000531893 322 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC011611.5-201ENST00000552477 578 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 RN7SL473P-201ENST00000580341 299 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MIR3668-201ENST00000582138 75 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MIR5682-201ENST00000584864 76 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 BNIP3P9-201ENST00000603714 553 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC079880.2-201ENST00000603790 1213 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AL365503.1-201ENST00000605247 905 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 MIR1302-2-201ENST00000607096 138 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 KRT7-214ENST00000638501 398 ntTSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AP001527.1-201ENST00000566440 1957 ntBASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 ERG-210ENST00000442448 5034 ntTSL 5 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC7.38□□□□□ -1.23
RSPO4Q2I0M5 AC145207.5-201ENST00000582866 2682 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms