Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 GAPDHP33-201ENST00000443168 1013 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AL158214.1-201ENST00000444423 404 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 RPL19P11-201ENST00000495944 589 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC131392.1-201ENST00000506490 633 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC103855.4-201ENST00000533158 265 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC117503.3-201ENST00000623811 601 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC061999.1-201ENST00000624454 177 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 TEX41-255ENST00000626404 610 ntTSL 5 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC006453.3-201ENST00000635891 377 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 NEK2P2-201ENST00000438441 1338 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 PSMC1P6-201ENST00000477233 1319 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC092451.3-201ENST00000625067 1343 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 LRRC37A15P-201ENST00000514785 1355 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 SMG1P5-202ENST00000529428 4219 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 SMG1P2-201ENST00000566127 4221 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC110373.1-201ENST00000505994 3505 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC068870.3-201ENST00000625077 2536 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 RPL5P20-201ENST00000403848 896 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 NACAP7-201ENST00000407371 609 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC092646.1-201ENST00000427142 901 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 UBBP5-201ENST00000446970 266 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC073648.3-201ENST00000504939 925 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC134698.1-201ENST00000511619 643 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC137549.1-201ENST00000514243 533 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 SNORD96A-201ENST00000606577 79 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC116165.3-201ENST00000614524 400 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC005514.1-201ENST00000623521 208 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC073488.9-201ENST00000631601 754 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC000095.2-202ENST00000637415 154 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HIST1H1AQ02539 AC010132.4-201ENST00000569883 1368 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 RBPJP6-201ENST00000411556 1431 ntBASIC4.85□□□□□ -1.63
HIST1H1AQ02539 SHQ1P1-201ENST00000437111 1544 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms