Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC007938.2-201ENST00000604666 2634 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 ZNF101P1-201ENST00000435701 1720 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HSPG2P98160 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HSPG2P98160 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 PRELID1P2-201ENST00000407805 396 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 HNRNPDLP2-201ENST00000455248 751 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 PDCL3P4-201ENST00000489621 720 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 AC068790.7-201ENST00000602347 528 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AL392048.1-201ENST00000613946 534 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HSPG2P98160 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HSPG2P98160 AC023824.7-201ENST00000623041 5731 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 MFSD8-219ENST00000641228 2559 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 FAM3C2-201ENST00000312214 681 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 SNORA11C-201ENST00000408532 129 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 CUBNP2-201ENST00000443534 1139 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 RN7SL41P-201ENST00000476144 297 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 OR11I1P-201ENST00000486033 954 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AC093824.1-201ENST00000508796 343 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 RN7SKP21-201ENST00000516503 220 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.63□□□□□ -1.83
HSPG2P98160 NMNAT1P5-201ENST00000559657 841 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AC009120.3-201ENST00000563335 499 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 AC136624.4-201ENST00000573044 370 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 CASC19-281ENST00000642118 1554 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 MROH3P-201ENST00000435735 2676 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 RNA5SP479-201ENST00000364858 117 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 RMRPP5-201ENST00000411156 267 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC3.63□□□□□ -1.83
HSPG2P98160 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 RAB9BP1-201ENST00000519581 626 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC3.63□□□□□ -1.83
HSPG2P98160 AP001521.2-201ENST00000608772 546 ntBASIC3.63□□□□□ -1.83
HSPG2P98160 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC3.63□□□□□ -1.83
HSPG2P98160 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HSPG2P98160 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HSPG2P98160 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC3.62□□□□□ -1.83
HSPG2P98160 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HSPG2P98160 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HSPG2P98160 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
HSPG2P98160 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.62□□□□□ -1.83
HSPG2P98160 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HSPG2P98160 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC3.62□□□□□ -1.83
HSPG2P98160 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HSPG2P98160 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HSPG2P98160 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HSPG2P98160 AL390774.1-201ENST00000411924 246 ntBASIC3.62□□□□□ -1.83
HSPG2P98160 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.62□□□□□ -1.83
HSPG2P98160 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC3.62□□□□□ -1.83
HSPG2P98160 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms