Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.22□□□□□ -1.25
CCNA1P78396 MRPS21P9-201ENST00000571150 257 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.22□□□□□ -1.25
CCNA1P78396 AC068768.2-201ENST00000602352 343 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 AC027243.2-201ENST00000602530 724 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 MIR6768-201ENST00000610734 72 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 AC109309.2-201ENST00000612597 332 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 TSHZ2-205ENST00000626626 670 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.22□□□□□ -1.25
CCNA1P78396 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 MTCO1P11-201ENST00000429111 1528 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCNA1P78396 AC078880.4-201ENST00000617627 1749 ntBASIC7.21□□□□□ -1.25
CCNA1P78396 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
CCNA1P78396 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.21□□□□□ -1.25
CCNA1P78396 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCNA1P78396 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCNA1P78396 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCNA1P78396 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCNA1P78396 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCNA1P78396 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.26
CCNA1P78396 RN7SKP229-201ENST00000410465 302 ntBASIC7.21□□□□□ -1.26
CCNA1P78396 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCNA1P78396 RPS7P14-201ENST00000426405 583 ntBASIC7.21□□□□□ -1.26
CCNA1P78396 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.21□□□□□ -1.26
CCNA1P78396 MTND6P12-201ENST00000428247 522 ntBASIC7.21□□□□□ -1.26
CCNA1P78396 PPIAP10-201ENST00000438675 458 ntBASIC7.21□□□□□ -1.26
CCNA1P78396 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.21□□□□□ -1.26
CCNA1P78396 CST12P-201ENST00000457644 362 ntBASIC7.21□□□□□ -1.26
CCNA1P78396 RN7SL834P-201ENST00000461450 286 ntBASIC7.21□□□□□ -1.26
CCNA1P78396 CR383658.1-201ENST00000514609 734 ntBASIC7.21□□□□□ -1.26
CCNA1P78396 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.21□□□□□ -1.26
CCNA1P78396 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.21□□□□□ -1.26
CCNA1P78396 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.21□□□□□ -1.26
CCNA1P78396 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.21□□□□□ -1.26
CCNA1P78396 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.21□□□□□ -1.26
CCNA1P78396 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.21□□□□□ -1.26
CCNA1P78396 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.21□□□□□ -1.26
CCNA1P78396 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.21□□□□□ -1.26
CCNA1P78396 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCNA1P78396 MIR6886-201ENST00000619864 61 ntBASIC7.21□□□□□ -1.26
CCNA1P78396 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.21□□□□□ -1.26
CCNA1P78396 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
CCNA1P78396 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CCNA1P78396 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCNA1P78396 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.26
CCNA1P78396 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCNA1P78396 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.21□□□□□ -1.26
CCNA1P78396 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCNA1P78396 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.21□□□□□ -1.26
CCNA1P78396 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
CCNA1P78396 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.2□□□□□ -1.26
CCNA1P78396 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CCNA1P78396 RNA5SP350-201ENST00000363298 111 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 RNA5SP156-201ENST00000410250 110 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 AL139415.1-201ENST00000424862 352 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 AC091390.2-201ENST00000432573 374 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.2□□□□□ -1.26
CCNA1P78396 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.2□□□□□ -1.26
CCNA1P78396 MORF4-201ENST00000447135 971 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.2□□□□□ -1.26
CCNA1P78396 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.2□□□□□ -1.26
CCNA1P78396 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.2□□□□□ -1.26
CCNA1P78396 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.2□□□□□ -1.26
CCNA1P78396 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.2□□□□□ -1.26
CCNA1P78396 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.2□□□□□ -1.26
CCNA1P78396 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.2□□□□□ -1.26
CCNA1P78396 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.2□□□□□ -1.26
CCNA1P78396 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.2□□□□□ -1.26
CCNA1P78396 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.2□□□□□ -1.26
CCNA1P78396 AC008627.1-201ENST00000517511 1704 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.2□□□□□ -1.26
CCNA1P78396 AC007993.1-201ENST00000621298 2430 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CCNA1P78396 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCNA1P78396 AC091305.2-201ENST00000624049 1576 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 SPATA31C1-201ENST00000420021 3895 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 AC010624.4-201ENST00000597606 1351 ntBASIC7.2□□□□□ -1.26
CCNA1P78396 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms