Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 Z83838.1-202ENST00000456225 839 ntBASIC4.29□□□□□ -1.72
RPL39P62891 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RPL39P62891 RPL12P7-201ENST00000493832 494 ntBASIC4.29□□□□□ -1.72
RPL39P62891 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 snoU109.5-201ENST00000516231 132 ntBASIC4.29□□□□□ -1.72
RPL39P62891 AL133399.1-201ENST00000527476 298 ntBASIC4.29□□□□□ -1.72
RPL39P62891 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 NPM1P5-201ENST00000557228 838 ntBASIC4.29□□□□□ -1.72
RPL39P62891 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.29□□□□□ -1.72
RPL39P62891 AC126323.4-201ENST00000566935 234 ntBASIC4.29□□□□□ -1.72
RPL39P62891 PPIAP14-201ENST00000577627 496 ntBASIC4.29□□□□□ -1.72
RPL39P62891 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.29□□□□□ -1.72
RPL39P62891 AC005224.3-201ENST00000584683 2140 ntBASIC4.29□□□□□ -1.72
RPL39P62891 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.29□□□□□ -1.72
RPL39P62891 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.29□□□□□ -1.72
RPL39P62891 AC024085.1-201ENST00000604299 432 ntBASIC4.29□□□□□ -1.72
RPL39P62891 AC114477.1-201ENST00000605097 605 ntBASIC4.29□□□□□ -1.72
RPL39P62891 AC069542.2-201ENST00000624816 216 ntBASIC4.29□□□□□ -1.72
RPL39P62891 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.29□□□□□ -1.72
RPL39P62891 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RPL39P62891 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.28□□□□□ -1.72
RPL39P62891 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.28□□□□□ -1.72
RPL39P62891 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 SMG1P5-202ENST00000529428 4219 ntBASIC4.28□□□□□ -1.72
RPL39P62891 SMG1P2-201ENST00000566127 4221 ntBASIC4.28□□□□□ -1.72
RPL39P62891 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 AC232271.1-201ENST00000602455 2715 ntBASIC4.28□□□□□ -1.72
RPL39P62891 NLRP3P1-201ENST00000622303 1785 ntBASIC4.28□□□□□ -1.72
RPL39P62891 AC016745.2-201ENST00000608834 3443 ntBASIC4.28□□□□□ -1.72
RPL39P62891 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RPL39P62891 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 RNA5SP453-201ENST00000362503 119 ntBASIC4.28□□□□□ -1.72
RPL39P62891 RN7SKP191-201ENST00000364713 306 ntBASIC4.28□□□□□ -1.72
RPL39P62891 RNU1-84P-201ENST00000365447 164 ntBASIC4.28□□□□□ -1.72
RPL39P62891 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 AC226101.1-201ENST00000401483 387 ntBASIC4.28□□□□□ -1.72
RPL39P62891 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 RPL5P2-201ENST00000429598 854 ntBASIC4.28□□□□□ -1.72
RPL39P62891 CR391992.1-201ENST00000438601 394 ntBASIC4.28□□□□□ -1.72
RPL39P62891 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 GTF2IP14-201ENST00000441415 586 ntBASIC4.28□□□□□ -1.72
RPL39P62891 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.28□□□□□ -1.72
RPL39P62891 AL353803.3-201ENST00000444641 335 ntBASIC4.28□□□□□ -1.72
RPL39P62891 GAPDHP23-201ENST00000444823 993 ntBASIC4.28□□□□□ -1.72
RPL39P62891 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.28□□□□□ -1.72
RPL39P62891 RN7SL70P-201ENST00000478322 302 ntBASIC4.28□□□□□ -1.72
RPL39P62891 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 AC093870.1-201ENST00000506837 213 ntBASIC4.28□□□□□ -1.72
RPL39P62891 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 RN7SKP288-201ENST00000516227 268 ntBASIC4.28□□□□□ -1.72
RPL39P62891 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.28□□□□□ -1.72
RPL39P62891 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 RN7SL426P-201ENST00000579106 295 ntBASIC4.28□□□□□ -1.72
RPL39P62891 SYPL1P2-201ENST00000582878 727 ntBASIC4.28□□□□□ -1.72
RPL39P62891 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 RPS4XP21-201ENST00000603814 750 ntBASIC4.28□□□□□ -1.72
RPL39P62891 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.28□□□□□ -1.72
RPL39P62891 HSPD1P1-201ENST00000503199 1726 ntBASIC4.28□□□□□ -1.72
RPL39P62891 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.28□□□□□ -1.72
RPL39P62891 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms