Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CKS1BP61024 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.46□□□□□ -1.69
CKS1BP61024 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.46□□□□□ -1.69
CKS1BP61024 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
CKS1BP61024 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CKS1BP61024 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.46□□□□□ -1.7
CKS1BP61024 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.46□□□□□ -1.7
CKS1BP61024 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC4.46□□□□□ -1.7
CKS1BP61024 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CKS1BP61024 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CKS1BP61024 NPM1P14-201ENST00000343743 866 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 OR10D1P-201ENST00000355343 936 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 RNU4-81P-201ENST00000363561 144 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CKS1BP61024 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CKS1BP61024 RAN-201ENST00000392367 780 ntTSL 5 BASIC4.46□□□□□ -1.7
CKS1BP61024 SNORA79B-201ENST00000410557 148 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 RPS7P12-201ENST00000422385 582 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC4.46□□□□□ -1.7
CKS1BP61024 AC105052.2-201ENST00000434317 794 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AC016908.1-201ENST00000442571 1219 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 AL354714.5-201ENST00000450131 590 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 VNN3-210ENST00000450865 596 ntTSL 4 BASIC4.46□□□□□ -1.7
CKS1BP61024 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC4.46□□□□□ -1.7
CKS1BP61024 MEF2AP1-201ENST00000454867 863 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AC004692.1-201ENST00000455430 424 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC4.46□□□□□ -1.7
CKS1BP61024 RPSAP48-201ENST00000466509 889 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CKS1BP61024 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.46□□□□□ -1.7
CKS1BP61024 SNX18P23-201ENST00000510867 677 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.46□□□□□ -1.7
CKS1BP61024 AC026774.2-201ENST00000513990 1098 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.46□□□□□ -1.7
CKS1BP61024 RNA5SP318-201ENST00000516352 92 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC4.46□□□□□ -1.7
CKS1BP61024 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC4.46□□□□□ -1.7
CKS1BP61024 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
CKS1BP61024 BOLA2P1-201ENST00000584794 232 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CKS1BP61024 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.46□□□□□ -1.7
CKS1BP61024 AL049840.5-201ENST00000602827 552 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 FAM72A-208ENST00000607379 1139 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AL139123.1-201ENST00000612008 430 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AC010320.5-201ENST00000619124 676 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AP000577.1-201ENST00000624366 878 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC4.46□□□□□ -1.7
CKS1BP61024 AL132640.3-201ENST00000630473 177 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 AL356585.10-201ENST00000641883 123 ntBASIC4.46□□□□□ -1.7
CKS1BP61024 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CKS1BP61024 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.46□□□□□ -1.7
CKS1BP61024 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CKS1BP61024 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.46□□□□□ -1.7
CKS1BP61024 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.46□□□□□ -1.7
CKS1BP61024 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
CKS1BP61024 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 AC100810.3-201ENST00000633189 2240 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
CKS1BP61024 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.45□□□□□ -1.7
CKS1BP61024 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 U3.14-201ENST00000365363 227 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 MIR128-2-201ENST00000384893 84 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AL391419.1-201ENST00000398901 1275 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CKS1BP61024 RNA5SP115-201ENST00000411160 107 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 RN7SKP296-201ENST00000411185 341 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 RNA5SP280-201ENST00000411230 115 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 TMA16P2-201ENST00000413187 601 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC234781.4-201ENST00000419384 244 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms