Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.12□□□□□ -1.43
CLDN6P56747 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.12□□□□□ -1.43
CLDN6P56747 RPL34P33-201ENST00000486062 334 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.12□□□□□ -1.43
CLDN6P56747 AC131392.1-201ENST00000506490 633 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.12□□□□□ -1.43
CLDN6P56747 RPL7L1P4-201ENST00000513004 707 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 RNA5SP271-201ENST00000516700 88 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 AC008627.1-201ENST00000517511 1704 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.12□□□□□ -1.43
CLDN6P56747 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.12□□□□□ -1.43
CLDN6P56747 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.12□□□□□ -1.43
CLDN6P56747 OR9L1P-201ENST00000529493 933 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.12□□□□□ -1.43
CLDN6P56747 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 MIR4489-201ENST00000578869 62 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 BUB1P1-201ENST00000603541 607 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 AC139493.1-201ENST00000604368 397 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 AC126175.1-201ENST00000617041 758 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 MIR6826-201ENST00000617808 98 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.12□□□□□ -1.43
CLDN6P56747 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.12□□□□□ -1.43
CLDN6P56747 AC011592.1-201ENST00000624647 3634 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.11□□□□□ -1.43
CLDN6P56747 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CLDN6P56747 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 CASC19-243ENST00000641588 1546 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CLDN6P56747 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 BRWD1P3-201ENST00000428816 390 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 AC245452.2-201ENST00000435222 392 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 GAPDHP48-201ENST00000436626 961 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 SOCS5P1-201ENST00000440415 949 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 ACA64.1-201ENST00000459171 127 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.11□□□□□ -1.43
CLDN6P56747 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.11□□□□□ -1.43
CLDN6P56747 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.11□□□□□ -1.43
CLDN6P56747 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 AC092121.1-201ENST00000569452 202 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 SNORD95-201ENST00000579879 68 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.11□□□□□ -1.43
CLDN6P56747 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.11□□□□□ -1.43
CLDN6P56747 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.11□□□□□ -1.43
CLDN6P56747 AC022467.1-201ENST00000614738 749 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CLDN6P56747 AC129778.1-202ENST00000623812 261 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 AL591379.1-207ENST00000635982 261 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.11□□□□□ -1.43
CLDN6P56747 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CLDN6P56747 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CLDN6P56747 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLDN6P56747 LCOR-201ENST00000286067 4542 ntBASIC6.11□□□□□ -1.43
CLDN6P56747 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.11□□□□□ -1.43
CLDN6P56747 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CLDN6P56747 ZNF812P-201ENST00000457674 1694 ntBASIC6.1□□□□□ -1.43
CLDN6P56747 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.1□□□□□ -1.43
CLDN6P56747 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLDN6P56747 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms