Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 LINC01613-201ENST00000561476 2780 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 AC005618.1-201ENST00000606901 3148 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 RNU1-46P-201ENST00000384425 164 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 YWHAZP4-201ENST00000392459 708 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 PRELID1P1-201ENST00000403549 660 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 RN7SKP281-201ENST00000410472 352 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 AL713922.1-201ENST00000416477 747 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AC002127.1-201ENST00000421305 225 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 RPL23AP85-201ENST00000421838 433 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 Z68868.1-201ENST00000429048 544 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 MED28P4-201ENST00000433137 572 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 AL354893.1-201ENST00000433735 348 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 MTND1P26-201ENST00000440488 538 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AC104339.1-201ENST00000465478 348 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 OR7E22P-201ENST00000478335 1035 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 GM2AP2-201ENST00000491764 562 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AL359091.2-201ENST00000609303 556 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 NF1P10-201ENST00000613227 742 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 AP003789.1-201ENST00000617737 605 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AP001885.1-201ENST00000621658 558 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AC009779.8-201ENST00000641684 4384 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CACNA2D1P54289 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CACNA2D1P54289 RPS2P45-201ENST00000469997 2057 ntBASIC6.85□□□□□ -1.31
CACNA2D1P54289 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CACNA2D1P54289 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CACNA2D1P54289 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CACNA2D1P54289 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 AL359694.2-201ENST00000567753 1615 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 SAGE3P-201ENST00000619800 1635 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CACNA2D1P54289 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CACNA2D1P54289 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CACNA2D1P54289 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CACNA2D1P54289 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 RPL11P4-201ENST00000332269 436 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 Y_RNA.110-201ENST00000363220 99 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 RNA5SP333-201ENST00000363466 118 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 RNA5SP334-201ENST00000364825 118 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 AL136116.2-201ENST00000404020 785 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 AC099535.1-201ENST00000408928 371 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 CASKP1-201ENST00000412870 582 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 AL360013.1-201ENST00000419031 858 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 CLNS1AP1-201ENST00000435954 682 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 H3F3AP5-201ENST00000475267 429 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 RNA5SP473-201ENST00000516402 125 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CACNA2D1P54289 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 OR7A11P-201ENST00000597719 953 ntBASIC6.84□□□□□ -1.31
CACNA2D1P54289 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.84□□□□□ -1.31
CACNA2D1P54289 AC110792.4-201ENST00000609843 298 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms