Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CYCSP17-201ENST00000407870 315 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 OSTCP4-201ENST00000424397 449 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 AC083862.1-201ENST00000427378 1242 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 HMGN1P6-201ENST00000438508 291 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.49□□□□□ -1.37
LIMK1P53667 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.49□□□□□ -1.37
LIMK1P53667 TVP23CP1-201ENST00000450317 639 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.49□□□□□ -1.37
LIMK1P53667 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.49□□□□□ -1.37
LIMK1P53667 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 AC110749.1-201ENST00000462007 357 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.49□□□□□ -1.37
LIMK1P53667 RN7SL187P-201ENST00000495587 303 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 H3F3AP3-201ENST00000497682 407 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.49□□□□□ -1.37
LIMK1P53667 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.49□□□□□ -1.37
LIMK1P53667 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.49□□□□□ -1.37
LIMK1P53667 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.49□□□□□ -1.37
LIMK1P53667 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.49□□□□□ -1.37
LIMK1P53667 MIR5095-201ENST00000578844 88 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 MIR4701-201ENST00000583094 63 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 AC015818.6-201ENST00000584274 634 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 RNU6-84P-201ENST00000607737 102 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.49□□□□□ -1.37
LIMK1P53667 AC138627.1-204ENST00000641894 765 ntBASIC6.49□□□□□ -1.37
LIMK1P53667 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.49□□□□□ -1.37
LIMK1P53667 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.49□□□□□ -1.37
LIMK1P53667 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.49□□□□□ -1.37
LIMK1P53667 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.49□□□□□ -1.37
LIMK1P53667 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LIMK1P53667 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK1P53667 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
LIMK1P53667 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 AC104837.1-201ENST00000444644 1587 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 AC022034.1-201ENST00000512867 2156 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LIMK1P53667 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK1P53667 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK1P53667 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
LIMK1P53667 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 SNORA38B-201ENST00000363524 131 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 RPL7P58-201ENST00000402913 758 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK1P53667 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK1P53667 BX510359.3-201ENST00000422168 306 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 DNAJC19P5-201ENST00000443295 316 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 SBDSP1-204ENST00000453858 737 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 RN7SL629P-201ENST00000489622 285 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 GM2AP2-201ENST00000491764 562 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 PSMA2P2-201ENST00000504319 686 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 LDHAP1-201ENST00000509421 992 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 AL162632.2-201ENST00000553933 399 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 AL683813.2-201ENST00000605245 502 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK1P53667 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LIMK1P53667 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.48□□□□□ -1.37
LIMK1P53667 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK1P53667 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.48□□□□□ -1.37
LIMK1P53667 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LIMK1P53667 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK1P53667 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK1P53667 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms