Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AL139123.1-201ENST00000612008 430 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 AC138904.2-201ENST00000614412 107 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 AL669830.1-201ENST00000621457 656 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 AC016542.3-201ENST00000623520 619 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 AL132640.3-201ENST00000630473 177 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 NEAT1-202ENST00000501122 22743 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF2A1P52655 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
GTF2A1P52655 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
GTF2A1P52655 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.03□□□□□ -1.44
GTF2A1P52655 HNRNPCP2-201ENST00000399515 881 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC6.03□□□□□ -1.44
GTF2A1P52655 PPIAP30-201ENST00000415473 519 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 EIF4A1P13-201ENST00000415667 230 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.03□□□□□ -1.44
GTF2A1P52655 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.03□□□□□ -1.44
GTF2A1P52655 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.03□□□□□ -1.44
GTF2A1P52655 NPM1P33-201ENST00000438918 872 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.03□□□□□ -1.44
GTF2A1P52655 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF2A1P52655 RPS2P25-201ENST00000467247 580 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF2A1P52655 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF2A1P52655 RFPL4AP5-201ENST00000514977 504 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.03□□□□□ -1.44
GTF2A1P52655 snoU109.5-201ENST00000516231 132 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF2A1P52655 OR7E1P-201ENST00000533891 958 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.03□□□□□ -1.44
GTF2A1P52655 UBE2CP4-201ENST00000561405 535 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF2A1P52655 CTSLP2-201ENST00000580501 394 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.03□□□□□ -1.44
GTF2A1P52655 AC061975.3-201ENST00000583209 244 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 BOLA2P1-201ENST00000584794 232 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 CARSP1-201ENST00000603171 889 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 AL157899.1-201ENST00000604110 936 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 AC004890.3-201ENST00000605566 1095 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 AC113361.1-201ENST00000606683 543 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 FAM27E3-202ENST00000614611 340 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 AP005212.3-201ENST00000619964 528 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.03□□□□□ -1.44
GTF2A1P52655 SAMMSON-227ENST00000642114 1199 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF2A1P52655 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
GTF2A1P52655 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
GTF2A1P52655 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 BTBD10P1-201ENST00000549824 1352 ntBASIC6.03□□□□□ -1.44
GTF2A1P52655 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF2A1P52655 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
GTF2A1P52655 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
GTF2A1P52655 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GTF2A1P52655 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GTF2A1P52655 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GTF2A1P52655 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
GTF2A1P52655 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GTF2A1P52655 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GTF2A1P52655 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GTF2A1P52655 SNORA70.6-201ENST00000383934 134 ntBASIC6.02□□□□□ -1.45
GTF2A1P52655 AC211486.3-201ENST00000412694 621 ntBASIC6.02□□□□□ -1.45
GTF2A1P52655 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.02□□□□□ -1.45
GTF2A1P52655 CHCHD3P1-201ENST00000425516 676 ntBASIC6.02□□□□□ -1.45
GTF2A1P52655 Z68868.1-201ENST00000429048 544 ntBASIC6.02□□□□□ -1.45
GTF2A1P52655 IGLV3-4-201ENST00000432300 244 ntBASIC6.02□□□□□ -1.45
GTF2A1P52655 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.02□□□□□ -1.45
GTF2A1P52655 ARMC8P1-201ENST00000443069 1289 ntBASIC6.02□□□□□ -1.45
GTF2A1P52655 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.02□□□□□ -1.45
GTF2A1P52655 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GTF2A1P52655 RN7SL379P-201ENST00000479912 293 ntBASIC6.02□□□□□ -1.45
GTF2A1P52655 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.02□□□□□ -1.45
GTF2A1P52655 RN7SL346P-201ENST00000491561 294 ntBASIC6.02□□□□□ -1.45
GTF2A1P52655 RN7SL143P-201ENST00000496780 297 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms