Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC015818.6-201ENST00000584274 634 ntBASIC5.88□□□□□ -1.47
RFC3P40938 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 AC026898.1-201ENST00000586404 571 ntBASIC5.88□□□□□ -1.47
RFC3P40938 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 SMIM12P1-201ENST00000603004 274 ntBASIC5.88□□□□□ -1.47
RFC3P40938 MIR6778-201ENST00000617912 73 ntBASIC5.88□□□□□ -1.47
RFC3P40938 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.88□□□□□ -1.47
RFC3P40938 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RFC3P40938 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 SAGE3P-201ENST00000619800 1635 ntBASIC5.88□□□□□ -1.47
RFC3P40938 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.88□□□□□ -1.47
RFC3P40938 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.88□□□□□ -1.47
RFC3P40938 AC083837.1-201ENST00000565297 2994 ntBASIC5.88□□□□□ -1.47
RFC3P40938 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 AC068769.1-201ENST00000474767 2426 ntBASIC5.87□□□□□ -1.47
RFC3P40938 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC3P40938 AC011504.1-201ENST00000623331 4103 ntBASIC5.87□□□□□ -1.47
RFC3P40938 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC3P40938 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.87□□□□□ -1.47
RFC3P40938 DHFRP2-201ENST00000414224 547 ntBASIC5.87□□□□□ -1.47
RFC3P40938 KCTD9P1-201ENST00000430462 1167 ntBASIC5.87□□□□□ -1.47
RFC3P40938 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.87□□□□□ -1.47
RFC3P40938 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 SNX18P24-201ENST00000505249 671 ntBASIC5.87□□□□□ -1.47
RFC3P40938 AC131392.1-201ENST00000506490 633 ntBASIC5.87□□□□□ -1.47
RFC3P40938 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.87□□□□□ -1.47
RFC3P40938 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC3P40938 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC3P40938 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.87□□□□□ -1.47
RFC3P40938 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 AL845552.1-201ENST00000556820 323 ntBASIC5.87□□□□□ -1.47
RFC3P40938 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.87□□□□□ -1.47
RFC3P40938 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.87□□□□□ -1.47
RFC3P40938 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC3P40938 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.87□□□□□ -1.47
RFC3P40938 AC097641.3-201ENST00000613523 464 ntBASIC5.87□□□□□ -1.47
RFC3P40938 AC063952.1-203ENST00000634410 658 ntBASIC5.87□□□□□ -1.47
RFC3P40938 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 AC005225.5-201ENST00000623547 2225 ntBASIC5.87□□□□□ -1.47
RFC3P40938 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC3P40938 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 CLCA3P-203ENST00000490028 2781 ntBASIC5.87□□□□□ -1.47
RFC3P40938 AC022905.1-201ENST00000503430 3048 ntBASIC5.87□□□□□ -1.47
RFC3P40938 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC3P40938 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC3P40938 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC3P40938 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.86□□□□□ -1.47
RFC3P40938 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RFC3P40938 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 BRD7P1-201ENST00000557705 1915 ntBASIC5.86□□□□□ -1.47
RFC3P40938 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.86□□□□□ -1.47
RFC3P40938 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RFC3P40938 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 RNU1-46P-201ENST00000384425 164 ntBASIC5.86□□□□□ -1.47
RFC3P40938 RNU6-316P-201ENST00000391027 107 ntBASIC5.86□□□□□ -1.47
RFC3P40938 AL157702.1-201ENST00000398764 426 ntBASIC5.86□□□□□ -1.47
RFC3P40938 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.86□□□□□ -1.47
RFC3P40938 RPL21P50-201ENST00000417698 477 ntBASIC5.86□□□□□ -1.47
RFC3P40938 VN1R3-201ENST00000418822 919 ntBASIC5.86□□□□□ -1.47
RFC3P40938 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.86□□□□□ -1.47
RFC3P40938 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.86□□□□□ -1.47
RFC3P40938 AC099782.1-201ENST00000425889 474 ntBASIC5.86□□□□□ -1.47
RFC3P40938 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.86□□□□□ -1.47
RFC3P40938 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms