Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SETP9-201ENST00000423837 832 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AC128677.1-201ENST00000436016 442 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 MRPS21P3-201ENST00000436696 262 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN6P29350 COL11A2P1-205ENST00000441798 676 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN6P29350 YRDCP3-201ENST00000456507 480 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AC004890.1-201ENST00000461005 181 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 GOLGA5P1-201ENST00000507317 980 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 AC138517.1-201ENST00000515724 568 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 RN7SKP248-201ENST00000516278 305 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN6P29350 AP001804.1-201ENST00000526868 919 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN6P29350 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN6P29350 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 BTG1P1-201ENST00000540396 508 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN6P29350 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 MIR212-201ENST00000586026 110 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AC068726.1-201ENST00000610993 341 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN6P29350 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN6P29350 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.03□□□□□ -1.44
PTPN6P29350 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PTPN6P29350 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PTPN6P29350 RNA5SP85-201ENST00000365378 119 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 MIR191-201ENST00000384873 92 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 RN7SKP146-201ENST00000410242 334 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 RANP6-201ENST00000413691 644 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 UBE2V1P14-201ENST00000415815 558 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 RPS17P17-201ENST00000419392 409 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN6P29350 AC007562.1-201ENST00000421819 517 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 AKR1B10P1-201ENST00000425765 942 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.03□□□□□ -1.44
PTPN6P29350 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN6P29350 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 AC023274.2-201ENST00000445264 521 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 RPS18P1-201ENST00000447840 458 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN6P29350 AC099670.1-201ENST00000455141 783 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 AL022319.1-201ENST00000458183 1167 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 AC005165.2-201ENST00000466070 380 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 SLC25A51P1-201ENST00000468432 871 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 MARK2P8-201ENST00000476069 952 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 AC135999.1-201ENST00000478962 479 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.03□□□□□ -1.44
PTPN6P29350 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.03□□□□□ -1.44
PTPN6P29350 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN6P29350 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.03□□□□□ -1.44
PTPN6P29350 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN6P29350 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.03□□□□□ -1.44
PTPN6P29350 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN6P29350 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.03□□□□□ -1.44
PTPN6P29350 AC114477.1-201ENST00000605097 605 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 AL021368.3-201ENST00000607119 578 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 GAPDHP41-201ENST00000613707 975 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTPN6P29350 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PTPN6P29350 GUCY1B2-204ENST00000531898 1979 ntBASIC6.03□□□□□ -1.44
PTPN6P29350 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PTPN6P29350 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.03□□□□□ -1.44
PTPN6P29350 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN6P29350 AL353743.3-201ENST00000442109 1468 ntBASIC6.02□□□□□ -1.44
PTPN6P29350 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
PTPN6P29350 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PTPN6P29350 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 RPL31P11-201ENST00000426558 1558 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms