Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
HLA-DMBP28068 AC068213.1-201ENST00000625124 226 ntBASIC4.83□□□□□ -1.64
HLA-DMBP28068 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMBP28068 AC022726.2-201ENST00000634673 547 ntBASIC4.83□□□□□ -1.64
HLA-DMBP28068 OR8A1-204ENST00000642111 1145 ntBASIC4.83□□□□□ -1.64
HLA-DMBP28068 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DMBP28068 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DMBP28068 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMBP28068 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DMBP28068 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HLA-DMBP28068 AC110373.1-201ENST00000505994 3505 ntBASIC4.83□□□□□ -1.64
HLA-DMBP28068 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMBP28068 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DMBP28068 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMBP28068 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMBP28068 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DMBP28068 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMBP28068 AC083837.1-201ENST00000565297 2994 ntBASIC4.83□□□□□ -1.64
HLA-DMBP28068 AL353763.1-201ENST00000624467 1628 ntBASIC4.83□□□□□ -1.64
HLA-DMBP28068 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DMBP28068 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 RN7SKP237-201ENST00000364663 301 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 LCN1P2-201ENST00000372030 223 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC245036.1-201ENST00000391727 309 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC121334.1-201ENST00000396414 802 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 SMARCE1P6-201ENST00000398372 1216 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 RN7SKP221-201ENST00000410420 301 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 RN7SKP281-201ENST00000410472 352 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 RN7SKP38-201ENST00000410782 309 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 CLNS1AP1-201ENST00000435954 682 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC099670.1-201ENST00000455141 783 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 AKR1D1P1-201ENST00000457236 936 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC005165.2-201ENST00000466070 380 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 RN7SL221P-201ENST00000466190 281 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC131392.1-201ENST00000506490 633 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC138517.1-201ENST00000515724 568 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC092718.4-201ENST00000566639 716 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC133552.4-201ENST00000576103 676 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 WBP1LP11-201ENST00000586141 328 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC016590.3-201ENST00000611171 753 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 AC015819.1-201ENST00000613588 663 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 MIR6085-201ENST00000618314 110 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 CREM-203ENST00000344351 1625 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DMBP28068 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 GUCY1B2-204ENST00000531898 1979 ntBASIC4.82□□□□□ -1.64
HLA-DMBP28068 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DMBP28068 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMBP28068 RNA5SP350-201ENST00000363298 111 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 RN7SKP186-201ENST00000365371 303 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 AL391419.1-201ENST00000398901 1275 ntBASIC4.81□□□□□ -1.64
HLA-DMBP28068 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DMBP28068 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms