Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 HMGB3P9-201ENST00000441799 583 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC9.42□□□□□ -0.9
PTPREP23469 RPS4XP4-201ENST00000443195 763 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AL512593.1-201ENST00000444758 779 ntBASIC9.42□□□□□ -0.9
PTPREP23469 GPM6BP1-201ENST00000446387 144 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AC073072.2-201ENST00000447425 348 ntBASIC9.42□□□□□ -0.9
PTPREP23469 EIF4A1P6-201ENST00000448133 1210 ntBASIC9.42□□□□□ -0.9
PTPREP23469 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC9.42□□□□□ -0.9
PTPREP23469 OR6C5P-201ENST00000452388 923 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AC114755.1-201ENST00000453101 868 ntBASIC9.42□□□□□ -0.9
PTPREP23469 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC9.42□□□□□ -0.9
PTPREP23469 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC9.42□□□□□ -0.9
PTPREP23469 AC009022.1-201ENST00000472115 496 ntBASIC9.42□□□□□ -0.9
PTPREP23469 RN7SL864P-201ENST00000493457 285 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PTPREP23469 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC9.42□□□□□ -0.9
PTPREP23469 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PTPREP23469 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC9.42□□□□□ -0.9
PTPREP23469 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
PTPREP23469 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC9.42□□□□□ -0.9
PTPREP23469 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC9.42□□□□□ -0.9
PTPREP23469 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC9.42□□□□□ -0.9
PTPREP23469 MIR5708-201ENST00000579723 85 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC9.42□□□□□ -0.9
PTPREP23469 OR7A18P-201ENST00000600416 277 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AC069304.2-201ENST00000605154 435 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC9.42□□□□□ -0.9
PTPREP23469 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC9.42□□□□□ -0.9
PTPREP23469 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC9.42□□□□□ -0.9
PTPREP23469 AC120349.2-201ENST00000625002 298 ntBASIC9.42□□□□□ -0.9
PTPREP23469 AL139254.2-202ENST00000641937 1156 ntBASIC9.42□□□□□ -0.9
PTPREP23469 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PTPREP23469 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PTPREP23469 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PTPREP23469 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
PTPREP23469 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC9.42□□□□□ -0.9
PTPREP23469 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
PTPREP23469 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC9.42□□□□□ -0.9
PTPREP23469 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC9.42□□□□□ -0.9
PTPREP23469 AC000367.1-201ENST00000452711 1766 ntBASIC9.42□□□□□ -0.9
PTPREP23469 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PTPREP23469 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PTPREP23469 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PTPREP23469 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 HM13-224ENST00000498035 3932 ntTSL 2 BASIC9.41□□□□□ -0.9
PTPREP23469 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC9.41□□□□□ -0.9
PTPREP23469 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 MTND4P14-201ENST00000435799 1354 ntBASIC9.41□□□□□ -0.9
PTPREP23469 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 CREM-207ENST00000356917 1895 ntTSL 2 BASIC9.41□□□□□ -0.9
PTPREP23469 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 SNORA63C-201ENST00000364578 129 ntBASIC9.41□□□□□ -0.9
PTPREP23469 RN7SKP48-201ENST00000365031 328 ntBASIC9.41□□□□□ -0.9
PTPREP23469 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PTPREP23469 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 AL121878.1-201ENST00000418638 859 ntBASIC9.41□□□□□ -0.9
PTPREP23469 NCOR1P3-201ENST00000420479 303 ntBASIC9.41□□□□□ -0.9
PTPREP23469 AC008155.1-201ENST00000421078 329 ntBASIC9.41□□□□□ -0.9
PTPREP23469 AL513185.2-201ENST00000425543 193 ntBASIC9.41□□□□□ -0.9
PTPREP23469 EIF4A1P10-201ENST00000428832 1216 ntBASIC9.41□□□□□ -0.9
PTPREP23469 AC073464.1-201ENST00000429823 534 ntBASIC9.41□□□□□ -0.9
PTPREP23469 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
PTPREP23469 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC9.41□□□□□ -0.9
PTPREP23469 AC002553.1-201ENST00000442828 802 ntBASIC9.41□□□□□ -0.9
PTPREP23469 RAD23BP3-201ENST00000454157 1152 ntBASIC9.41□□□□□ -0.9
PTPREP23469 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC9.41□□□□□ -0.9
PTPREP23469 AL590639.1-201ENST00000456484 337 ntBASIC9.41□□□□□ -0.9
PTPREP23469 CST12P-201ENST00000457644 362 ntBASIC9.41□□□□□ -0.9
PTPREP23469 RPS3AP49-201ENST00000472161 790 ntBASIC9.41□□□□□ -0.9
PTPREP23469 PGBD4P1-201ENST00000473644 407 ntBASIC9.41□□□□□ -0.9
PTPREP23469 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 RN7SL464P-201ENST00000492743 297 ntBASIC9.41□□□□□ -0.9
PTPREP23469 RPL7P24-201ENST00000493052 752 ntBASIC9.41□□□□□ -0.9
PTPREP23469 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC9.41□□□□□ -0.9
PTPREP23469 AC008799.1-201ENST00000495909 457 ntBASIC9.41□□□□□ -0.9
PTPREP23469 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 KRT18P54-201ENST00000513396 748 ntBASIC9.41□□□□□ -0.9
PTPREP23469 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC9.41□□□□□ -0.9
PTPREP23469 AC091304.5-201ENST00000568969 158 ntBASIC9.41□□□□□ -0.9
PTPREP23469 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 MIR548AB-201ENST00000584917 84 ntBASIC9.41□□□□□ -0.9
PTPREP23469 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC9.41□□□□□ -0.9
PTPREP23469 AL590560.2-201ENST00000608430 732 ntBASIC9.41□□□□□ -0.9
PTPREP23469 MIR6731-201ENST00000614863 72 ntBASIC9.41□□□□□ -0.9
PTPREP23469 AC018816.2-201ENST00000621460 353 ntBASIC9.41□□□□□ -0.9
PTPREP23469 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC9.41□□□□□ -0.9
PTPREP23469 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 AC092162.3-201ENST00000624511 1624 ntBASIC9.41□□□□□ -0.9
PTPREP23469 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PTPREP23469 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC9.41□□□□□ -0.9
PTPREP23469 ASAP1-IT2-201ENST00000626977 2031 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms