Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.82□□□□□ -1.48
NCK1P16333 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NCK1P16333 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NCK1P16333 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NCK1P16333 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NCK1P16333 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NCK1P16333 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.82□□□□□ -1.48
NCK1P16333 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.82□□□□□ -1.48
NCK1P16333 AL451061.1-201ENST00000407887 862 ntBASIC5.82□□□□□ -1.48
NCK1P16333 AC083855.1-201ENST00000440041 258 ntBASIC5.82□□□□□ -1.48
NCK1P16333 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.82□□□□□ -1.48
NCK1P16333 GTF2IP14-201ENST00000441415 586 ntBASIC5.82□□□□□ -1.48
NCK1P16333 AC239800.1-201ENST00000442049 719 ntBASIC5.82□□□□□ -1.48
NCK1P16333 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NCK1P16333 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.82□□□□□ -1.48
NCK1P16333 IGKV1D-32-201ENST00000517449 318 ntBASIC5.82□□□□□ -1.48
NCK1P16333 GTF2IP11-201ENST00000526931 420 ntBASIC5.82□□□□□ -1.48
NCK1P16333 AL133399.1-201ENST00000527476 298 ntBASIC5.82□□□□□ -1.48
NCK1P16333 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.82□□□□□ -1.48
NCK1P16333 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.82□□□□□ -1.48
NCK1P16333 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.82□□□□□ -1.48
NCK1P16333 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.82□□□□□ -1.48
NCK1P16333 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.82□□□□□ -1.48
NCK1P16333 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.82□□□□□ -1.48
NCK1P16333 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.82□□□□□ -1.48
NCK1P16333 AC114477.1-201ENST00000605097 605 ntBASIC5.82□□□□□ -1.48
NCK1P16333 AL121985.3-201ENST00000620690 523 ntBASIC5.82□□□□□ -1.48
NCK1P16333 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.82□□□□□ -1.48
NCK1P16333 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NCK1P16333 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NCK1P16333 AL355834.1-201ENST00000556602 3965 ntBASIC5.82□□□□□ -1.48
NCK1P16333 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.82□□□□□ -1.48
NCK1P16333 AC137056.2-201ENST00000624055 1958 ntBASIC5.82□□□□□ -1.48
NCK1P16333 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.82□□□□□ -1.48
NCK1P16333 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.82□□□□□ -1.48
NCK1P16333 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NCK1P16333 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
NCK1P16333 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NCK1P16333 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NCK1P16333 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.81□□□□□ -1.48
NCK1P16333 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 TET1P1-201ENST00000426627 2301 ntBASIC5.81□□□□□ -1.48
NCK1P16333 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 AC140134.1-201ENST00000511830 3544 ntBASIC5.81□□□□□ -1.48
NCK1P16333 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.81□□□□□ -1.48
NCK1P16333 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NCK1P16333 SNORD1C-201ENST00000363315 78 ntBASIC5.81□□□□□ -1.48
NCK1P16333 RNA5SP429-201ENST00000363688 109 ntBASIC5.81□□□□□ -1.48
NCK1P16333 SNORA43.1-201ENST00000364863 140 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 RANP7-201ENST00000418085 644 ntBASIC5.81□□□□□ -1.48
NCK1P16333 GRPEL2P2-201ENST00000421856 670 ntBASIC5.81□□□□□ -1.48
NCK1P16333 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.81□□□□□ -1.48
NCK1P16333 KATNBL1P2-201ENST00000433311 835 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 OR52U1P-201ENST00000439752 923 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 AC114982.2-201ENST00000461396 358 ntBASIC5.81□□□□□ -1.48
NCK1P16333 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 AC093870.1-201ENST00000506837 213 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 AC096661.1-201ENST00000515870 822 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.81□□□□□ -1.48
NCK1P16333 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 AF186192.2-204ENST00000581667 524 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.81□□□□□ -1.48
NCK1P16333 AP001357.1-201ENST00000586304 1053 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 MIR6731-201ENST00000614863 72 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AL137067.2-201ENST00000621202 131 ntBASIC5.81□□□□□ -1.48
NCK1P16333 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.81□□□□□ -1.48
NCK1P16333 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NCK1P16333 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 AL136984.1-201ENST00000607611 1893 ntBASIC5.81□□□□□ -1.48
NCK1P16333 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NCK1P16333 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCK1P16333 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.81□□□□□ -1.48
NCK1P16333 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms