Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL11A1P12107 AC092692.1-201ENST00000623625 2595 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 AC092111.1-201ENST00000618256 3358 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 PARP4P1-201ENST00000435945 2337 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.94□□□□□ -1.3
COL11A1P12107 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL11A1P12107 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL11A1P12107 FUNDC2P3-201ENST00000334716 533 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.94□□□□□ -1.3
COL11A1P12107 OR2W4P-201ENST00000406496 926 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 AL035660.1-201ENST00000422041 222 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL11A1P12107 AC064862.4-201ENST00000442180 334 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 NPM1P19-201ENST00000450070 712 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 RN7SL269P-201ENST00000467795 305 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
COL11A1P12107 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.94□□□□□ -1.3
COL11A1P12107 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.94□□□□□ -1.3
COL11A1P12107 AC051619.2-201ENST00000559063 397 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 DPPA2P4-201ENST00000563717 878 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 MIR3176-201ENST00000582210 90 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 OR7E18P-201ENST00000592589 702 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 RN7SL544P-201ENST00000617232 284 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL11A1P12107 RN7SL763P-201ENST00000620922 284 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL11A1P12107 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL11A1P12107 AL591848.4-201ENST00000567832 3472 ntBASIC6.94□□□□□ -1.3
COL11A1P12107 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL11A1P12107 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
COL11A1P12107 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
COL11A1P12107 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.93□□□□□ -1.3
COL11A1P12107 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL11A1P12107 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL11A1P12107 RPS2P45-201ENST00000469997 2057 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.93□□□□□ -1.3
COL11A1P12107 AC027088.4-201ENST00000611559 1947 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
COL11A1P12107 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL11A1P12107 RNA5SP178-201ENST00000410380 128 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.93□□□□□ -1.3
COL11A1P12107 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.93□□□□□ -1.3
COL11A1P12107 AC127526.2-201ENST00000426436 775 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.93□□□□□ -1.3
COL11A1P12107 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.93□□□□□ -1.3
COL11A1P12107 AC104164.1-201ENST00000460282 590 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 AC008638.1-201ENST00000506035 866 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.93□□□□□ -1.3
COL11A1P12107 SNORA70.20-201ENST00000516848 126 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.93□□□□□ -1.3
COL11A1P12107 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL11A1P12107 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.93□□□□□ -1.3
COL11A1P12107 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.93□□□□□ -1.3
COL11A1P12107 AL021918.2-201ENST00000613415 194 ntBASIC6.93□□□□□ -1.3
COL11A1P12107 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC6.93□□□□□ -1.3
COL11A1P12107 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
COL11A1P12107 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.93□□□□□ -1.3
COL11A1P12107 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL11A1P12107 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL11A1P12107 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.93□□□□□ -1.3
COL11A1P12107 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
COL11A1P12107 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.92□□□□□ -1.3
COL11A1P12107 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.92□□□□□ -1.3
COL11A1P12107 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 RPS3AP2-201ENST00000407190 754 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 RPL34P3-201ENST00000421454 338 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.92□□□□□ -1.3
COL11A1P12107 AL512637.1-201ENST00000439523 1231 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.92□□□□□ -1.3
COL11A1P12107 RPS27AP3-201ENST00000453803 454 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 RN7SL165P-201ENST00000477476 291 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.92□□□□□ -1.3
COL11A1P12107 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.92□□□□□ -1.3
COL11A1P12107 AL445649.1-201ENST00000615941 691 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 TCL6_3.1-201ENST00000619064 137 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 AL357153.4-201ENST00000620487 1016 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 AC022919.1-201ENST00000624979 626 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 AL157831.2-201ENST00000564681 3095 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.92□□□□□ -1.3
COL11A1P12107 AC011504.1-201ENST00000623331 4103 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.92□□□□□ -1.3
COL11A1P12107 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 AL161901.1-201ENST00000624954 3425 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.92□□□□□ -1.3
COL11A1P12107 CDY5P-201ENST00000411487 1580 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 CDY9P-201ENST00000451397 1580 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL11A1P12107 MIR323A-201ENST00000362199 86 ntBASIC6.92□□□□□ -1.3
COL11A1P12107 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms