Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB2P05538 AC011416.1-201ENST00000514947 1732 ntBASIC6.28□□□□□ -1.4
HLA-DQB2P05538 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.27□□□□□ -1.4
HLA-DQB2P05538 AC079753.1-201ENST00000623243 3868 ntBASIC6.27□□□□□ -1.4
HLA-DQB2P05538 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 RNA5SP110-201ENST00000362638 115 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 RN7SKP171-201ENST00000364417 303 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 RNA5SP279-201ENST00000365513 117 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AL360271.1-201ENST00000395679 510 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 RN7SKP144-201ENST00000411108 279 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 PSMD10P2-201ENST00000432890 672 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 OR3D1P-201ENST00000438288 955 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AC112484.3-201ENST00000505910 329 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 OR6M2P-201ENST00000529831 871 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 OR1E3-201ENST00000575608 948 ntBASIC6.27□□□□□ -1.41
HLA-DQB2P05538 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB2P05538 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AL359091.1-201ENST00000449048 1734 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AC092865.3-201ENST00000425390 1026 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 BMP6P1-201ENST00000431230 679 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 RN7SL362P-201ENST00000494228 267 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 RNA5SP434-201ENST00000516647 121 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 BMS1P16-201ENST00000556075 1147 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 RN7SL230P-201ENST00000580835 303 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AC027334.1-201ENST00000603257 310 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 MIR6889-201ENST00000613185 59 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AC111152.1-202ENST00000635848 339 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AC073342.2-201ENST00000595842 1800 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 HSPD1P8-201ENST00000400121 1658 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 AL121768.1-201ENST00000613917 2544 ntBASIC6.26□□□□□ -1.41
HLA-DQB2P05538 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DQB2P05538 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AL354707.3-201ENST00000427308 331 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AC108479.1-201ENST00000431142 427 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AL354893.1-201ENST00000433735 348 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AL512593.1-201ENST00000444758 779 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AC090958.1-201ENST00000511122 351 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms