Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.89□□□□□ -1.47
UPK1AO00322 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.89□□□□□ -1.47
UPK1AO00322 RBMY2HP-201ENST00000457961 720 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 RN7SL369P-201ENST00000477138 299 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
UPK1AO00322 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 MRPL57P6-201ENST00000506570 309 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.89□□□□□ -1.47
UPK1AO00322 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.89□□□□□ -1.47
UPK1AO00322 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.89□□□□□ -1.47
UPK1AO00322 AC233699.1-201ENST00000569955 1168 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 MIR5010-201ENST00000582846 120 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 AC063977.7-201ENST00000594454 337 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.89□□□□□ -1.47
UPK1AO00322 OR7E91P-202ENST00000642062 1198 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.89□□□□□ -1.47
UPK1AO00322 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
UPK1AO00322 HDAC1P2-201ENST00000453661 1398 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
UPK1AO00322 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.89□□□□□ -1.47
UPK1AO00322 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
UPK1AO00322 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
UPK1AO00322 WDR95P-201ENST00000425638 1542 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UPK1AO00322 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
UPK1AO00322 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UPK1AO00322 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
UPK1AO00322 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UPK1AO00322 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
UPK1AO00322 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 SNORA64.3-201ENST00000365647 134 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 MIR433-201ENST00000384837 93 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 MIR551B-201ENST00000384984 96 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
UPK1AO00322 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.88□□□□□ -1.47
UPK1AO00322 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UPK1AO00322 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.88□□□□□ -1.47
UPK1AO00322 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.88□□□□□ -1.47
UPK1AO00322 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.88□□□□□ -1.47
UPK1AO00322 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.88□□□□□ -1.47
UPK1AO00322 USP24P1-201ENST00000433802 779 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 MRPS21P3-201ENST00000436696 262 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 EMC3-AS1-205ENST00000438698 534 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 ARMC4P1-201ENST00000438905 707 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC064862.5-201ENST00000440618 334 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 OR2L9P-201ENST00000444456 913 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 RPL7L1P3-201ENST00000455249 689 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.88□□□□□ -1.47
UPK1AO00322 RPL12P31-201ENST00000478433 450 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.88□□□□□ -1.47
UPK1AO00322 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC138517.1-201ENST00000515724 568 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 AP001267.4-201ENST00000602598 545 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC006924.1-201ENST00000610750 559 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC069234.4-201ENST00000621276 412 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 AC089999.3-201ENST00000622440 577 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC116667.2-201ENST00000641075 823 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 AC114876.1-201ENST00000490962 1366 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.88□□□□□ -1.47
UPK1AO00322 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
UPK1AO00322 AC009135.2-201ENST00000624136 1768 ntBASIC5.88□□□□□ -1.47
UPK1AO00322 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
UPK1AO00322 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.87□□□□□ -1.47
UPK1AO00322 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 AC015799.1-201ENST00000622996 3122 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.87□□□□□ -1.47
UPK1AO00322 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
UPK1AO00322 AL445238.1-204ENST00000400311 463 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 AL133260.1-201ENST00000405720 405 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.87□□□□□ -1.47
UPK1AO00322 RPS7P14-201ENST00000426405 583 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms