Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
NPIPB9F8W1W9 CASC19-246ENST00000641625 1606 ntBASIC5.77□□□□□ -1.48
NPIPB9F8W1W9 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RNA5SP485-201ENST00000365053 119 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RNA5SP77-201ENST00000365394 120 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 LCN1P2-201ENST00000372030 223 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 PRELID1P1-201ENST00000403549 660 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RNA5SP198-201ENST00000410376 127 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RN7SKP121-201ENST00000410842 305 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 HMGA1P8-201ENST00000414130 321 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 NME1P1-201ENST00000420914 382 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RPL12P49-201ENST00000441100 121 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC073476.1-201ENST00000452854 407 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC099670.1-201ENST00000455141 783 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RNA5SP206-201ENST00000516703 121 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AP001858.2-201ENST00000536213 601 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC090115.2-201ENST00000548060 883 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 NPIPB1P-202ENST00000588786 828 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 DYNLL1P1-201ENST00000595442 269 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 AL591167.1-201ENST00000607321 456 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 MIR6823-201ENST00000622118 61 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 HDAC1P2-201ENST00000453661 1398 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 LINC01613-201ENST00000561476 2780 ntBASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPB9F8W1W9 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 IMMTP1-201ENST00000435590 2219 ntBASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 NCOA4P2-201ENST00000340589 1813 ntBASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 AC068769.1-201ENST00000474767 2426 ntBASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 AC096921.2-201ENST00000561507 1916 ntBASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
NPIPB9F8W1W9 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms