Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC002400.1-201ENST00000569310 726 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC012175.1-201ENST00000603755 531 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 MTND3P19-201ENST00000603825 345 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 DUXAP11-201ENST00000603858 526 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AL356986.1-201ENST00000604085 341 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC024589.2-201ENST00000605642 1294 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC013562.2-201ENST00000611632 603 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC109309.2-201ENST00000612597 332 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 RPL23AP61-201ENST00000623642 466 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC073530.2-201ENST00000623987 261 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC027279.1-201ENST00000568885 4284 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AP003471.1-202ENST00000319051 1988 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 LINC01613-201ENST00000561476 2780 ntBASIC8.39□□□□□ -1.07
TMEM88BA6NKF7 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC073342.2-201ENST00000595842 1800 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 SNORD113-6-201ENST00000363345 75 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 MIR142-201ENST00000384835 87 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AL031779.1-201ENST00000415663 330 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 MYL6P3-201ENST00000436904 432 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AL353754.1-201ENST00000440219 340 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 YWHAZP2-201ENST00000440317 728 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 RN7SL101P-201ENST00000496350 279 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC106872.4-201ENST00000510050 523 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 PPIAP6-201ENST00000557078 499 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 MIR4502-201ENST00000580432 81 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 RPL29P33-201ENST00000587474 316 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC006967.3-201ENST00000594086 1093 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AL138895.2-201ENST00000603019 178 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC009237.15-201ENST00000610252 501 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC004241.2-201ENST00000614562 444 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC010435.1-201ENST00000623353 1177 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC024023.1-201ENST00000624530 922 ntBASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.38□□□□□ -1.07
TMEM88BA6NKF7 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms