Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 AC117409.1-201ENST00000470499 1310 ntBASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 EEF1A1P11-201ENST00000415278 1389 ntBASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 AL391261.1-201ENST00000555712 1479 ntBASIC7.94□□□□□ -1.14
PCDHB11Q9Y5F2 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 TMSB4XP4-201ENST00000323496 618 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RNA5SP149-201ENST00000364952 92 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC096664.1-201ENST00000393996 778 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC003045.1-201ENST00000398779 713 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 PIGPP2-201ENST00000411569 458 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC019181.1-201ENST00000417151 310 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC008155.1-201ENST00000421078 329 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 YBX1P8-201ENST00000421881 943 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RPL4P4-201ENST00000422486 1284 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RPL7P44-201ENST00000424827 742 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 PRPS1P2-201ENST00000430496 937 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL645936.2-201ENST00000430565 928 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 MORF4L1P5-201ENST00000433352 961 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL021939.1-201ENST00000441868 886 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RPL7P36-201ENST00000444633 681 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC004801.2-201ENST00000468202 779 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RN7SL864P-201ENST00000493457 285 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC105252.1-201ENST00000503089 286 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 KRT18P54-201ENST00000513396 748 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RNU6-875P-201ENST00000516488 106 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 PPP1R1AP1-201ENST00000525622 425 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC087280.1-201ENST00000530632 1003 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL049870.4-201ENST00000555741 486 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 IGHV1OR15-4-201ENST00000560037 348 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 UBE2FP2-201ENST00000566646 462 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 MIR4666A-201ENST00000580160 79 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RPL35AP25-201ENST00000584631 330 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AL078623.1-201ENST00000602702 907 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 BNIP3P9-201ENST00000603714 553 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC005962.2-201ENST00000611427 652 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC016999.2-201ENST00000614692 556 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RN7SL113P-201ENST00000619959 299 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 RPL23AP61-201ENST00000623642 466 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC134981.1-201ENST00000628076 348 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 AC018880.1-201ENST00000418898 1319 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.93□□□□□ -1.14
PCDHB11Q9Y5F2 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
PCDHB11Q9Y5F2 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms