Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 MITF-203ENST00000328528 4680 ntTSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 RN7SKP161-201ENST00000411110 305 ntBASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 SUMO2P3-201ENST00000438311 288 ntBASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 AC073581.1-201ENST00000519036 575 ntBASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 AC005244.1-201ENST00000582566 339 ntBASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 AC110716.2-201ENST00000563865 3945 ntBASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 AC119674.1-202ENST00000641333 1860 ntBASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SHANK2Q9UPX8 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 OR7E101P-201ENST00000400428 513 ntBASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 GAPDHP58-201ENST00000438477 1006 ntBASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 H2AFZP6-201ENST00000444403 394 ntBASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 AP006222.1-205ENST00000450734 457 ntBASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 AL122020.1-201ENST00000472287 459 ntBASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 IGLV2-28-201ENST00000520681 304 ntBASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 AC141002.1-201ENST00000607025 279 ntBASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 ING3-204ENST00000431467 1447 ntTSL 2 BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SHANK2Q9UPX8 SPTLC1P2-201ENST00000407089 121 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 SDHDP6-201ENST00000414693 480 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 RPSAP37-201ENST00000470913 821 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 AC079600.1-201ENST00000550326 297 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 AL356801.1-201ENST00000559320 294 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 AC044860.2-201ENST00000561005 179 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 AC011369.2-201ENST00000624423 1567 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 AC022905.1-201ENST00000503430 3048 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 AC092821.3-202ENST00000641304 2767 ntBASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SHANK2Q9UPX8 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 RN7SKP160-201ENST00000363804 340 ntBASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 LSM5-203ENST00000409782 649 ntTSL 5 BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 AL035660.1-201ENST00000422041 222 ntBASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 AC127526.2-201ENST00000426436 775 ntBASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 AL445665.1-202ENST00000452436 324 ntBASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 PFN1P6-201ENST00000476786 399 ntBASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC9.15□□□□□ -0.95
SHANK2Q9UPX8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms