Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC005632.2-201ENST00000564271 828 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AL135999.3-201ENST00000610501 812 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AP001264.1-201ENST00000620602 703 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC009269.6-201ENST00000621778 588 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AP000550.3-201ENST00000637734 379 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC006927.4-201ENST00000639187 543 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC140479.2-201ENST00000421567 3130 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AC068446.1-201ENST00000556425 1549 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 SNORD35A-201ENST00000363389 86 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 RNA5SP232-201ENST00000364144 119 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 YWHAZP6-201ENST00000399764 738 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 DHFRP2-201ENST00000414224 547 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AL357078.2-201ENST00000416486 427 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 FAR1P1-201ENST00000427163 934 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 RPSAP65-201ENST00000429660 595 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 UBE2V1P6-201ENST00000430840 422 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 RBMY3AP-201ENST00000449381 1145 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 GM2AP2-201ENST00000491764 562 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 RPL37P23-201ENST00000492641 294 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 MAPK10-261ENST00000641050 3109 ntBASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNPO2Q9UMS6 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 AL136520.1-201ENST00000600311 1322 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 AC007406.5-201ENST00000570140 3170 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 OR2M1P-201ENST00000318104 951 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 SNORD16-201ENST00000362803 99 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 AC003045.1-201ENST00000398779 713 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 MTND4P11-201ENST00000417020 1058 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 CR848007.2-201ENST00000424918 787 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 RPL12P31-201ENST00000478433 450 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 AC112484.3-201ENST00000505910 329 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 AC110760.3-202ENST00000515177 371 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 RNA5SP116-201ENST00000516132 98 ntBASIC7.53□□□□□ -1.2
SYNPO2Q9UMS6 Vault.2-201ENST00000516519 98 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms