Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC079315.1-201ENST00000602952 623 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AP001437.1-201ENST00000608783 456 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AL445647.2-201ENST00000615170 130 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 AL356094.1-201ENST00000624663 1212 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC080188.3-201ENST00000624842 748 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC011592.1-201ENST00000624647 3634 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 FTO-203ENST00000460382 1517 ntTSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 SNORA51.9-201ENST00000384295 124 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC023141.3-201ENST00000436698 278 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 RN7SL326P-201ENST00000477493 296 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 RBBP4P1-201ENST00000502424 1276 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC007423.1-201ENST00000605009 627 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 SNORA74.4-201ENST00000607595 199 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC022106.1-201ENST00000612834 766 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC104162.1-201ENST00000430831 2382 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL20A1Q9P218 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 AC092821.3-202ENST00000641304 2767 ntBASIC7.19□□□□□ -1.26
COL20A1Q9P218 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL20A1Q9P218 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 QRSL1P1-201ENST00000400977 1540 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 RNA5SP188-201ENST00000362916 129 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 RNU1-24P-201ENST00000364285 165 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 MIR130B-202ENST00000385018 82 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 HIGD1AP16-201ENST00000450986 258 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 PPIAP7-201ENST00000454070 489 ntBASIC7.18□□□□□ -1.26
COL20A1Q9P218 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL20A1Q9P218 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.18□□□□□ -1.26
COL20A1Q9P218 MTND6P8-201ENST00000503471 522 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms