Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC013488.1-201ENST00000526618 1838 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AKAP17BP-201ENST00000431706 2719 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC073365.1-203ENST00000641055 1992 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC093278.2-201ENST00000564956 2485 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 RN7SKP275-201ENST00000364626 301 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AL451142.1-201ENST00000375867 775 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AMYP1-201ENST00000440059 1023 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC094085.1-201ENST00000468914 584 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 UGT2A3P7-201ENST00000510485 734 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC008055.1-201ENST00000547032 609 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC023968.1-201ENST00000560719 475 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 LINC02495-203ENST00000636704 242 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 AL359694.2-201ENST00000567753 1615 ntBASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
TM9SF3Q9HD45 CCAT2-201ENST00000630920 1752 ntBASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 ICE2P1-201ENST00000512800 1849 ntBASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 AC025809.2-201ENST00000625085 1802 ntBASIC6.46□□□□□ -1.37
TM9SF3Q9HD45 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AL353626.3-201ENST00000413399 657 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 RPL31P11-201ENST00000426558 1558 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AL354707.3-201ENST00000427308 331 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC245452.2-201ENST00000435222 392 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 DNAJA1P5-201ENST00000440278 943 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 SNX18P25-201ENST00000510539 758 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC004232.1-201ENST00000571388 208 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC107993.1-201ENST00000591343 684 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC091167.5-201ENST00000605689 894 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 RPSAP75-201ENST00000605848 301 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AL365181.4-201ENST00000609800 547 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AL136097.3-201ENST00000611097 505 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AL352984.2-201ENST00000611153 546 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 MIR6085-201ENST00000618314 110 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms