Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 GPN3P1-201ENST00000423883 535 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC083862.1-201ENST00000427378 1242 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 H3F3BP1-201ENST00000440551 403 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC092601.1-201ENST00000444526 383 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 OR7E158P-201ENST00000524483 910 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 MIR3157-201ENST00000578688 85 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 GAPDHP41-201ENST00000613707 975 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AC020658.4-201ENST00000613987 684 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AL354950.1-201ENST00000614150 568 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 AL353743.3-201ENST00000442109 1468 ntBASIC6.53□□□□□ -1.36
PCDH9Q9HC56 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH9Q9HC56 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
PCDH9Q9HC56 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC125238.2-201ENST00000430003 1440 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 SNORD16-201ENST00000362803 99 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 RN7SKP281-201ENST00000410472 352 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC007562.1-201ENST00000421819 517 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AL157884.1-201ENST00000424561 454 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC023274.2-201ENST00000445264 521 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 RPS18P1-201ENST00000447840 458 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 RBMY2HP-201ENST00000457961 720 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC018645.1-201ENST00000505003 109 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 NACAP5-201ENST00000509863 636 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 OR4A6P-201ENST00000534364 970 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC090651.1-201ENST00000567865 634 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC025283.1-201ENST00000572039 734 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC005479.3-201ENST00000602790 431 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC010809.3-201ENST00000621310 641 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 LINC02495-203ENST00000636704 242 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 AC007603.3-201ENST00000636915 979 ntBASIC6.52□□□□□ -1.37
PCDH9Q9HC56 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH9Q9HC56 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 RNU1-59P-201ENST00000364829 162 ntBASIC6.51□□□□□ -1.37
PCDH9Q9HC56 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 RNU6-167P-201ENST00000384292 106 ntBASIC6.51□□□□□ -1.37
PCDH9Q9HC56 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 AL034417.1-201ENST00000399343 800 ntBASIC6.51□□□□□ -1.37
PCDH9Q9HC56 RFESDP1-201ENST00000422350 461 ntBASIC6.51□□□□□ -1.37
PCDH9Q9HC56 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH9Q9HC56 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms