Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC108463.1-201ENST00000450258 347 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 IGBP1P4-201ENST00000503202 879 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC006530.1-201ENST00000555980 571 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 VN1R65P-201ENST00000566443 808 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC027281.1-201ENST00000574178 758 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 MIR4700-201ENST00000578311 74 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC068726.1-201ENST00000610993 341 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC107075.1-201ENST00000613695 314 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AL158196.1-201ENST00000616786 434 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC127502.3-201ENST00000636170 1206 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 ATE1-AS1-202ENST00000636460 506 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC012464.3-201ENST00000604017 2773 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 UBE2V2-204ENST00000520809 2450 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 XRCC6P3-201ENST00000422187 1621 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 SCIMP-203ENST00000574081 2383 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 OARD1-210ENST00000479950 3330 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC091173.1-201ENST00000505627 2750 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 ABI2-211ENST00000422511 2718 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 IARS2P1-201ENST00000508226 3173 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC017002.4-201ENST00000604721 1525 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AHI1-202ENST00000327035 3638 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 TRO-208ENST00000420798 3613 ntTSL 2 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 RNFT1P3-201ENST00000340898 1052 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 RN7SKP69-201ENST00000365390 305 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 TPMTP3-201ENST00000411928 735 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 PA2G4P6-201ENST00000438325 1197 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 SSXP1-201ENST00000453640 473 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 RPS27AP16-201ENST00000492222 470 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 RNU6-358P-201ENST00000516564 75 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC044836.1-201ENST00000519514 274 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 RPL41P2-201ENST00000544920 409 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AL445383.1-201ENST00000554689 874 ntBASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.85□□□□□ -1.15
COL25A1Q9BXS0 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms