Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC091167.5-201ENST00000605689 894 ntBASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 AL096712.1-201ENST00000614561 159 ntBASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 AL445649.1-201ENST00000615941 691 ntBASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 AL157831.2-201ENST00000564681 3095 ntBASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
RPAP1Q9BWH6 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC011815.2-201ENST00000618230 2021 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AL157884.1-201ENST00000424561 454 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 SNX18P26-201ENST00000458433 740 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 KHDC1P1-201ENST00000511053 508 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 NATP-201ENST00000523491 878 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 TRIM77BP-201ENST00000524985 1119 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 NANOGNBP2-201ENST00000544753 553 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC090115.2-201ENST00000548060 883 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC090826.1-203ENST00000569235 490 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AL132640.3-201ENST00000630473 177 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC105235.1-201ENST00000623208 1816 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 AC006213.6-201ENST00000623722 4179 ntBASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RPAP1Q9BWH6 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC009135.2-201ENST00000624136 1768 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC004386.1-201ENST00000393214 761 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 RPS21P8-201ENST00000413365 247 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC007568.1-201ENST00000422912 471 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AL355355.1-201ENST00000442900 793 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC010240.2-201ENST00000445363 1205 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AL590004.3-202ENST00000445883 451 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 RN7SKP35-201ENST00000517210 151 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC018558.5-201ENST00000565840 952 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 OR7A1P-201ENST00000601206 970 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC092266.1-201ENST00000610958 165 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 FAM27E2-201ENST00000619668 403 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 AC018659.2-201ENST00000624690 715 ntBASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RPAP1Q9BWH6 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
RPAP1Q9BWH6 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.65□□□□□ -1.19
RPAP1Q9BWH6 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.65□□□□□ -1.19
RPAP1Q9BWH6 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RPAP1Q9BWH6 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RPAP1Q9BWH6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms