Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 CDY17P-201ENST00000414121 1282 ntBASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP2Q96SN8 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AC008171.1-201ENST00000395058 200 ntBASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 RN7SKP166-201ENST00000410812 305 ntBASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 RPL12P12-201ENST00000424633 501 ntBASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AC141002.1-201ENST00000607025 279 ntBASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AC084782.1-201ENST00000564401 2465 ntBASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AC092725.2-201ENST00000567658 1389 ntBASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 AL391261.1-201ENST00000555712 1479 ntBASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP2Q96SN8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AL353662.1-201ENST00000439099 327 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC011742.2-201ENST00000443818 352 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 TRIM60P16-201ENST00000444048 694 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AP006222.1-205ENST00000450734 457 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC093166.4-201ENST00000457867 318 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC124945.1-201ENST00000485133 188 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 RN7SL101P-201ENST00000496350 279 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC244502.2-201ENST00000543361 851 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC020978.7-201ENST00000575953 1187 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC020765.1-201ENST00000604296 328 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 Z93929.1-201ENST00000418200 1475 ntBASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP2Q96SN8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 AL031651.1-201ENST00000615357 1438 ntBASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP2Q96SN8 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms