Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL121985.3-201ENST00000620690 523 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC135068.11-201ENST00000636378 921 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AL929601.4-201ENST00000613011 1341 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.67□□□□□ -1.5
RFT1Q96AA3 AC024651.2-201ENST00000562480 2098 ntBASIC5.67□□□□□ -1.5
RFT1Q96AA3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC015689.2-201ENST00000528172 1738 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC232271.1-201ENST00000602455 2715 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 WDR95P-201ENST00000425638 1542 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 CASKP1-201ENST00000412870 582 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC079922.1-201ENST00000443291 359 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 SNX18P26-201ENST00000458433 740 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 ENPP7P3-201ENST00000509123 241 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 SNORD116-30-201ENST00000516468 85 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC130364.2-201ENST00000528639 604 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 WDR45BP1-201ENST00000583470 1029 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC002044.3-201ENST00000623314 541 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC027279.4-201ENST00000624371 2072 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 OR5M2P-202ENST00000641241 4242 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 NEK2P2-201ENST00000438441 1338 ntBASIC5.66□□□□□ -1.5
RFT1Q96AA3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFT1Q96AA3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.66□□□□□ -1.5
RFT1Q96AA3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFT1Q96AA3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFT1Q96AA3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFT1Q96AA3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFT1Q96AA3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 AL121835.1-201ENST00000404250 354 ntBASIC5.65□□□□□ -1.5
RFT1Q96AA3 MTND4LP21-201ENST00000415303 295 ntBASIC5.65□□□□□ -1.5
RFT1Q96AA3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 OR13K1P-201ENST00000444577 975 ntBASIC5.65□□□□□ -1.5
RFT1Q96AA3 AL022237.1-201ENST00000446663 358 ntBASIC5.65□□□□□ -1.5
RFT1Q96AA3 AC103563.5-201ENST00000455643 364 ntBASIC5.65□□□□□ -1.5
RFT1Q96AA3 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 RPL10P7-201ENST00000495649 625 ntBASIC5.65□□□□□ -1.5
RFT1Q96AA3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 CARSP2-201ENST00000520688 277 ntBASIC5.65□□□□□ -1.5
RFT1Q96AA3 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.65□□□□□ -1.5
RFT1Q96AA3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms